LOCUS BC093872 1389 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens ectodysplasin A receptor, mRNA (cDNA clone MGC:120907 IMAGE:7939717), complete cds. ACCESSION BC093872 VERSION BC093872.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1389) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1389) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 1 Row: k Column: 11. FEATURES Location/Qualifiers source 1..1389 /db_xref="H-InvDB:HIT000334847" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120907 IMAGE:7939717" /tissue_type="Liver, PCR rescued clones" /clone_lib="NIH_MGC_291" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TCCTCCCA" gene 1..1389 /gene="EDAR" /gene_synonym="ED1R" /gene_synonym="ED5" /gene_synonym="EDA-A1R" /gene_synonym="EDA1R" /gene_synonym="EDA3" /db_xref="GeneID:10913" /db_xref="HGNC:HGNC:2895" /db_xref="MIM:604095" CDS 24..1370 /gene="EDAR" /gene_synonym="ED1R" /gene_synonym="ED5" /gene_synonym="EDA-A1R" /gene_synonym="EDA1R" /gene_synonym="EDA3" /codon_start=1 /product="ectodysplasin A receptor" /protein_id="AAH93872.1" /db_xref="GeneID:10913" /db_xref="HGNC:HGNC:2895" /db_xref="MIM:604095" /translation="MAHVGDCTQTPWLPVLVVSLMCSARAEYSNCGENEYYNQTTGLC QECPPCGPGEEPYLSCGYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVL TPGDMENDAECGPCLPGYYMLENRPRNIYGMVCYSCLLAPPNTKECVGATSGASANFP GTSGSSTLSPFQHAHKELSGQGHLATALIIAMSTIFIMAIAIVLIIMFYILKTKPSAP ACCTSHPGKSVEAQVSKDEEKKEAPDNVVMFSEKDEFEKLTATPAKPTKSENDASSEN EQLLSRSVDSDEEPAPDKQGSPELCLLSLVHLAREKSATSNKSAGIQSRRKKILDVYA NVCGVVEGLSPTELPFDCLEKTSRMLSSTYNSEKAVVKTWRHLAESFGLKRDEIGGMT DGMQLFDRISTAGYSIPELLTKLVQIERLDAVESLCADILEWAGVVPPASQPHAAS" BASE COUNT 317 a 409 c 411 g 252 t ORIGIN 1 gccaggtgag cccttgggag aggatggccc atgtggggga ctgcacgcag acgccctggc 61 tccccgtcct ggtggtgtct ctgatgtgct cagcccgagc ggaatactca aactgcggtg 121 agaacgagta ctacaaccag actacggggc tgtgccagga gtgccccccg tgtgggccgg 181 gagaggagcc ctacctgtcc tgtggctacg gcaccaaaga cgaggactac ggctgcgtcc 241 cctgcccggc ggagaagttt tccaaaggag gctaccagat atgcaggcgt cacaaagact 301 gtgagggctt cttccgggcc accgtgctga caccagggga catggagaat gacgctgagt 361 gtggcccttg cctccctggc tactacatgc tggagaacag accgaggaac atctatggca 421 tggtctgcta ctcctgcctc ctggcacccc ccaacaccaa ggaatgtgtg ggagccactt 481 caggagcttc tgccaacttc cctggcacct cgggcagcag caccctgtct cccttccagc 541 acgcccacaa agaactctca ggccaaggac acctggccac tgccctgatc attgcaatgt 601 ccaccatctt catcatggcc atcgccatcg tcctcatcat catgttctac atcctgaaga 661 caaagccctc tgccccagcc tgttgcacca gccacccggg gaagagcgtg gaggcccaag 721 tgagcaagga cgaggagaag aaagaggccc cagacaacgt ggtgatgttc tctgagaagg 781 atgaatttga gaagctgaca gcaactccag caaagcccac caagagcgag aacgatgcct 841 catccgagaa tgagcagctg ctgagccgga gcgtcgacag tgatgaggag cccgcccctg 901 acaagcaggg ctccccggag ctgtgcctgc tgtcgctggt tcacctggcc agggagaagt 961 ctgccaccag caacaagtca gccgggattc aaagccggag gaaaaagatc ctcgatgtgt 1021 atgccaacgt gtgtggagtc gtggaaggtc ttagccccac ggagctgcca tttgattgtc 1081 tcgagaagac tagccgaatg ctcagctcca cgtacaactc tgagaaggct gttgtgaaaa 1141 cgtggcgcca cctcgccgag agcttcggcc tgaagaggga tgagattggg ggcatgacag 1201 acggcatgca actctttgac cgcatcagca cggcaggcta cagcatccct gagctactca 1261 caaaactggt gcagattgag cggctggatg ctgtggagtc cttgtgtgca gacatactgg 1321 agtgggcggg ggttgtgcca cctgcctccc agccacatgc tgcatcctga aaagcatgcc 1381 tgtgggctg //