LOCUS BC093852 2628 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens transmembrane and tetratricopeptide repeat containing 2, mRNA (cDNA clone MGC:120887 IMAGE:7939697), complete cds. ACCESSION BC093852 VERSION BC093852.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2628) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2628) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 1 Row: j Column: 15. FEATURES Location/Qualifiers source 1..2628 /db_xref="H-InvDB:HIT000334827" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120887 IMAGE:7939697" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AGCAAACC" gene 1..2628 /gene="TMTC2" /gene_synonym="DKFZp762A217" /db_xref="GeneID:160335" /db_xref="HGNC:HGNC:25440" CDS 90..2600 /gene="TMTC2" /gene_synonym="DKFZp762A217" /codon_start=1 /product="transmembrane and tetratricopeptide repeat containing 2" /protein_id="AAH93852.1" /db_xref="GeneID:160335" /db_xref="HGNC:HGNC:25440" /translation="MIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLPETPWT HIFYNDFWGTLLTHSGSHKSYRPLCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLF TSFSKILLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYIKHCS TRGYSARTWGWFLGSGLCAGCSMLWKEQGVTVLAVSAVYDVFVFHRLKIKQILPTIYK RKNLSLFLSISLLIFWGSSLLGARLYWMGNKPPSFSNSDNPAADSDSLLTRTLTFFYL PTKNLWLLLCPDTLSFDWSMDAVPLLKTVCDWRNLHTVAFYTGLLLLAYYGLKSPSVD RECNGKTVTNGKQNANGHSCLSDVEYQNSETKSSFASKVENGIKNDVSQRTQLPSTEN IVVLSLSLLIIPFVPATNLFFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQKRF LKSLIFYATATLIVFYGLKTAIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSK ISEAESAYRNALYYRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLN TGIILMNQGRTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEE ALSVYKEAIQKMPRQFAPQSLYNMMGEAYMRLSKLPEAEHWYMESLRSKTDHIPAHLT YGKLLALTGRKSEAEKLFLKAIELDPTKGNCYMHYGQFLLEEARLIEAAEMAKKAAEL DSTEFDVVFNAAHMLRQASLNEAAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQKA EANYLRALQLKPDDVITQSNLRKLWNIMEKQGLKTSKT" BASE COUNT 697 a 630 c 619 g 682 t ORIGIN 1 cggcggaagg tggagattga tgcttctgtt ttttgttgcc gctgctgccc tcgcgctggg 61 agccgagccg gagggaaggc ggtggagaga tgattgcaga gttggtgagc agcgctctgg 121 ggctcgcctt gtatctcaac accctgagtg cggatttctg ctatgatgac agccgtgcta 181 tcaagactaa tcaggacctt ctcccagaaa ctccatggac gcacattttc tacaatgatt 241 tttgggggac tcttctaacc cacagtggca gccacaagtc ctaccggcca ctctgcactc 301 tttcttttcg cctgaaccat gccattggag ggttgaatcc ctggagctac catcttgtca 361 atgtcctgtt gcatgcagca gtcactggtc tcttcacaag cttctccaag atcctccttg 421 gtgatggata ctggacattc atggctggct tgatgtttgc ttctcacccc attcacacgg 481 aggcagtggc aggaatcgtg ggacgagccg atgtcggggc cagtctcttc tttctcctct 541 ccttgctctg ctacattaaa cactgttcta caagaggcta ctcagccaga acctggggct 601 ggttcctggg gtcaggactg tgcgcaggat gcagcatgtt gtggaaggaa caaggagtga 661 ctgttctcgc agtttcagca gtttatgatg tctttgtctt tcacaggctg aaaataaaac 721 agatattacc taccatttac aaaaggaaga acttgtcgct tttcctaagc attagtttgt 781 taattttctg gggttcctcc cttttgggtg cccggttata ctggatggga aacaaaccac 841 caagcttttc caactcggac aaccccgctg ctgattcgga cagcctcctc acccgcactc 901 tcaccttctt ctacttgcca accaagaacc tctggctgtt gctatgtcca gataccctca 961 gttttgattg gtcaatggat gctgtgcctc tgctcaaaac agtttgtgac tggagaaacc 1021 tacacactgt ggccttctat actggactcc ttctccttgc ctactatggt ttgaagagcc 1081 cgagcgtaga cagagaatgc aatgggaaaa ctgtaacaaa tggcaagcag aatgcaaatg 1141 gacatagctg cctttcagat gtggagtacc agaactcaga gactaagtcc agctttgcat 1201 ccaaagtaga aaatggcatt aaaaacgatg tatcacagag aacccagctt ccttctacgg 1261 agaacattgt tgttctgtct ttatctttgt taatcatacc ctttgttcct gccacgaacc 1321 tgtttttcta tgtcggcttt gtaattgcag agcgagtatt atatattcct agtatgggct 1381 tctgcctact gattacagtg ggcgctagag ccctttatgt caaagtccaa aagcggttcc 1441 tcaagagctt gattttttat gctacagcta cactaattgt tttttatgga ctcaagactg 1501 cgatcaggaa tggagactgg cagaatgagg aaatgcttta tagatcaggg ataaaagtaa 1561 acccagctaa agcatggggt aaccttggaa atgttctgaa gagtcagagc aaaatttctg 1621 aagctgaaag cgcctataga aatgctttgt actaccgcag caacatggct gacatgcttt 1681 ataatttagg gctacttctc caggagaaca gcaggtttgc agaagcacta cattattata 1741 aattggccat tgggagcagg cctaccctgg cttctgcata tttaaatacc ggtattattc 1801 taatgaacca aggaaggacg gaagaagccc gacggacatt cttaaagtgt tcggagatcc 1861 cagatgaaaa cctaaaggac cctcatgcac acaagagctc tgttaccagt tgtttgtaca 1921 acctaggaaa gctgtatcat gagcagggac actatgagga agcccttagt gtatacaagg 1981 aagcaattca gaaaatgcca aggcagtttg ccccacagag cttgtacaac atgatgggtg 2041 aagcatatat gcgtttaagc aaactccccg aagcagagca ttggtatatg gaatcactga 2101 gatccaagac tgaccacatc cctgctcatc tcacctatgg gaagctgcta gctctaacag 2161 gtcgtaagag tgaggctgaa aagctcttct tgaaggctat tgagctggat cccaccaaag 2221 gaaactgtta catgcattat ggtcagtttc ttctggaaga agctcgtctc atagaagcag 2281 ctgagatggc aaaaaaagca gctgaactag acagcacaga gtttgatgtt gtcttcaatg 2341 ctgcccacat gctcagacag gctagcctca atgaagcagc tgagaagtat tatgatctgg 2401 cagccaggct gaggcctaat tatccggctg ctttgatgaa cctgggagcc attctgcacc 2461 tcaatggcag actccagaag gccgaggcca actacctgcg ggccctgcag ctcaagccag 2521 acgatgtcat cacacagtcc aatctccgca aactgtggaa catcatggaa aaacaaggct 2581 taaagacttc taagacctga cacaggaggc agaagcccat cctcctcc //