LOCUS BC093789 3531 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens transient receptor potential cation channel, subfamily M, member 5, mRNA (cDNA clone MGC:120824 IMAGE:7939634), complete cds. ACCESSION BC093789 VERSION BC093789.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3531) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3531) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 1 Row: g Column: 24. FEATURES Location/Qualifiers source 1..3531 /db_xref="H-InvDB:HIT000334764" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120824 IMAGE:7939634" /tissue_type="Colon, PCR rescued clones" /clone_lib="NIH_MGC_295" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: ACCTCTCT" gene 1..3531 /gene="TRPM5" /gene_synonym="LTRPC5" /gene_synonym="MTR1" /db_xref="GeneID:29850" /db_xref="HGNC:HGNC:14323" /db_xref="MIM:604600" CDS 7..3504 /gene="TRPM5" /gene_synonym="LTRPC5" /gene_synonym="MTR1" /codon_start=1 /product="transient receptor potential cation channel, subfamily M, member 5" /protein_id="AAH93789.1" /db_xref="GeneID:29850" /db_xref="HGNC:HGNC:14323" /db_xref="MIM:604600" /translation="MQDVQGPRPGSPGDAEDRRELGLHRGEVNFGGSGKKRGKFVRVP SGVAPSVLFDLLLAEWHLPAPNLVVSLVGEEQPFAMKSWLRDVLRKGLVKAAQSTGAW ILTSALRVGLARHVGQAVRDHSLASTSTKVRVVAVGMASLGRVLHRRILEEAQEDFPV HYPEDDGGSQGPLCSLDSNLSHFILVEPGPPGKGDGLTELRLRLEKHISEQRAGYGGT GSIEIPVLCLLVNGDPNTLERISRAVEQAAPWLILAGSGGIADVLAALVNQPHLLVPK VAEKQFKEKFPSKHFSWEDIVRWTKLLQNITSHQHLLTVYDFEQEGSEELDTVILKAL VKACKSHSQEPQDYLDELKLAVAWDRVDIAKSEIFNGDVEWKSCDLEEVMVDALVSNK PEFVRLFVDNGADVADFLTYGRLQELYRSVSRKSLLFDLLQRKQEEARLTLAGLGTQQ AREPPAGPPAFSLHEVSRVLKDFLQDACRGFYQDGRPGDRRRAEKGPAKRPTGQKWLL DLNQKSENPWRDLFLWAVLQNRHEMATYFWAMGQEGVAAALAACKILKEMSHLETEAE AARATREAKYERLALDLFSECYSNSEARAFALLVRRNRCWSKTTCLHLATEADAKAFF AHDGVQAFLTRIWWGDMAAGTPILRLLGAFLCPALVYTNLITFSEEAPLRTGLEDLQD LDSLDTEKSPLYGLQSRVEELVEAPRAQGDRGPRAVFLLTRWRKFWGAPVTVFLGNVV MYFAFLFLFTYVLLVDFRPPPQGPSGPEVTLYFWVFTLVLEEIRQGFFTDEDTHLVKK FTLYVGDNWNKCDMVAIFLFIVGVTCRMLPSAFEAGRTVLAMDFMVFTLRLIHIFAIH KQLGPKIIVVERMMKDVFFFLFFLSVWLVAYGVTTQALLHPHDGRLEWIFRRVLYRPY LQIFGQIPLDEIDEARVNCSTHPLLLEDSPSCPSLYANWLVILLLVTFLLVTNVLLMN LLIAMFSYTFQVVQGNADMFWKFQRYNLIVEYHERPALAPPFILLSHLSLTLRRVFKK EAEHKREHLERDLPDPLDQKVVTWETVQKENFLSKMEKRRRDSEGEVLRKTAHRVDFI AKYLGGLREQEKRIKCLESQINYCSVLVSSVADVLAQGGGPRSSQHCGEGSQLVAADH RGGLDGWEQPGAGQPPSDT" BASE COUNT 637 a 1103 c 1152 g 639 t ORIGIN 1 gccaccatgc aggatgtcca aggcccccgt cccggaagcc ccggggatgc tgaagaccgg 61 cgggagctgg gcttgcacag gggcgaggtc aactttggag ggtctgggaa gaagcgaggc 121 aagtttgtac gggtgccgag cggagtggcc ccgtctgtgc tctttgacct gctgcttgct 181 gagtggcacc tgccagcccc caacctggtg gtgtccctgg tgggtgagga gcagcctttc 241 gccatgaagt cctggctgcg ggatgtgctg cgcaaggggc tggtgaaggc ggctcagagc 301 acaggagcct ggatcctgac cagtgccctc cgcgtgggcc tggccaggca tgtcgggcag 361 gccgtgcgcg accactcgct ggccagcacg tccaccaagg tccgtgtggt tgctgtcggc 421 atggcctcgc tgggccgcgt cctgcaccgc cgcattctgg aggaggccca ggaggatttt 481 cctgtccact accctgagga tgacggcggc agccagggcc ccctctgttc actggacagc 541 aacctctccc acttcatcct ggtggagcca ggccccccgg ggaagggcga tgggctgacg 601 gagctgcggc tgaggctgga gaagcacatc tcggagcaga gggcgggcta cgggggcact 661 ggcagcatcg agatccctgt cctctgcttg ctggtcaatg gtgatcccaa caccttggag 721 aggatctcca gggccgtgga gcaggctgcc ccgtggctga tcctggcagg ctcggggggc 781 atcgccgatg tgcttgctgc cctagtgaac cagccccacc tcctggtgcc caaggtggcc 841 gagaagcagt ttaaggagaa gttccccagc aagcatttct cttgggagga catcgtgcgc 901 tggaccaagc tgctgcagaa catcacctca caccagcacc tgctcaccgt gtatgacttc 961 gagcaggagg gctccgagga gctggacacg gtcatcctga aggcgctggt gaaagcctgc 1021 aagagccaca gccaggagcc tcaggactat ctggatgagc tcaagctggc cgtggcctgg 1081 gaccgcgtgg acatcgccaa gagtgagatc ttcaatgggg acgtggagtg gaagtcctgt 1141 gacctggagg aggtgatggt ggacgccctg gtcagcaaca agcccgagtt tgtgcgcctc 1201 tttgtggaca acggcgcaga cgtggccgac ttcctgacgt atgggcggct gcaggagctc 1261 taccgctctg tgtcacgcaa gagcctgctc ttcgacctgc tgcagcggaa gcaggaggag 1321 gcccggctga cgctggccgg cctgggcacc cagcaggccc gggagccacc cgcggggcca 1381 ccggccttct ccctgcacga ggtctcccgc gtactcaagg acttcctgca ggacgcctgc 1441 cgaggcttct accaggacgg ccggccaggg gaccgcagga gggcggagaa gggcccggcc 1501 aagcggccca cgggccagaa gtggctgctg gacctgaacc agaagagcga gaacccctgg 1561 cgggacctgt tcctgtgggc cgtgctgcag aaccgccacg agatggccac ctacttctgg 1621 gccatgggcc aggaaggtgt ggcagccgca ctggccgcct gcaaaatcct caaagagatg 1681 tcgcacctgg agacggaggc cgaggcggcc cgagccacgc gcgaggcgaa atacgagcgg 1741 ctggcccttg acctcttctc cgagtgctac agcaacagtg aggcccgcgc cttcgccctg 1801 ctggtgcgcc ggaaccgctg ctggagcaag accacctgcc tgcacctggc caccgaggct 1861 gacgccaagg ccttctttgc ccacgacggc gttcaggcct tcctgaccag gatctggtgg 1921 ggggacatgg ccgcaggcac gcccatcctg cggctgctag gagccttcct ctgccccgcc 1981 ctcgtctata ccaacctcat caccttcagt gaggaagctc ccctgaggac aggcctggag 2041 gacctgcagg acctggacag cctggacacg gagaagagcc cgctgtatgg cctgcagagc 2101 cgggtggagg agctggtgga ggcgccgagg gctcagggtg accgaggccc acgtgctgtc 2161 ttcctgctca cacgctggcg gaaattctgg ggcgctcccg tgactgtgtt cctggggaac 2221 gtggtcatgt acttcgcctt cctcttcctg ttcacctacg tcctgctggt ggacttcagg 2281 ccgccccccc agggcccctc agggcccgag gtcaccctct acttctgggt ctttacgctg 2341 gtgctggagg aaatccggca gggcttcttc acagacgagg acacacacct ggtgaagaag 2401 ttcacactgt atgtggggga caactggaac aagtgtgaca tggtggccat cttcctgttc 2461 atcgtgggtg tcacctgcag gatgctgccg tcggcgtttg aggctggccg cacagtcctc 2521 gccatggact tcatggtgtt cacgctgcgg ctgatccata tctttgccat acacaagcag 2581 ctgggcccca agatcatcgt ggtagagcgc atgatgaagg acgtcttctt cttcctcttc 2641 tttctgagcg tgtggctcgt ggcctacggt gtcaccaccc aggcgctgct gcacccccat 2701 gacggccgcc tggagtggat cttccgccgg gtgctctacc ggccctacct gcagatcttc 2761 ggccagatcc cactggacga gattgatgaa gcccgtgtga actgctccac ccacccactg 2821 ctgctggagg actcaccatc ctgccccagc ctctatgcca actggctggt catcctcctg 2881 ctggtcacct tcctgttggt caccaatgtg ctgctcatga acctgctcat cgccatgttc 2941 agctacacgt tccaggtggt gcagggcaac gcagacatgt tctggaagtt ccagcgctac 3001 aacctgattg tggagtacca cgagcgcccc gccctggccc cgcccttcat cctgctcagc 3061 cacctgagcc tgacgctccg ccgggtcttc aagaaggagg ctgagcacaa gcgggagcac 3121 ctggagagag acctgccaga ccccctggac cagaaggtcg tcacctggga gacagtccag 3181 aaggagaact tcctgagcaa gatggagaag cggaggaggg acagcgaggg ggaggtgctg 3241 cggaaaaccg cccacagagt ggacttcatt gccaagtacc tcgggggtct gagagagcaa 3301 gaaaagcgca tcaagtgtct ggagtcacag atcaactact gctcggtgct cgtgtcctcc 3361 gtggctgacg tgctggccca gggtggcggc ccccggagct ctcagcactg tggcgaggga 3421 agccagctgg tggctgctga ccacagaggt ggtttagatg gctgggaaca acccggggct 3481 ggccagcctc cctcggacac ctgagctgct tggcctgcca cgtgtggggc c //