LOCUS BC093704 1271 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens thioredoxin interacting protein, mRNA (cDNA clone MGC:120739 IMAGE:7939549), complete cds. ACCESSION BC093704 VERSION BC093704.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1271) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1271) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 1 Row: d Column: 11. FEATURES Location/Qualifiers source 1..1271 /db_xref="H-InvDB:HIT000334679" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:120739 IMAGE:7939549" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: GCCTCGCT" gene 1..1271 /gene="TXNIP" /gene_synonym="EST01027" /gene_synonym="HHCPA78" /gene_synonym="THIF" /gene_synonym="VDUP1" /db_xref="GeneID:10628" /db_xref="HGNC:HGNC:16952" /db_xref="MIM:606599" CDS 75..1250 /gene="TXNIP" /gene_synonym="EST01027" /gene_synonym="HHCPA78" /gene_synonym="THIF" /gene_synonym="VDUP1" /codon_start=1 /product="thioredoxin interacting protein" /protein_id="AAH93704.1" /db_xref="GeneID:10628" /db_xref="HGNC:HGNC:16952" /db_xref="MIM:606599" /translation="MVMFKKIKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAV RILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFG FELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQETKKNFEVVDLVDVNTPDLMAPV SAKKEKKVSCMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTCSRIVVPKAAIVAR HTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCNILRVEYSL LIYVSVPGSKKVILDLPLVIGSRSGLSSRTSSMASRTSSEMSWVDLNIPDTPEAPPCY MDVIPEDHRLESPTTPLLDDMDGSQDSPIFMYAPEFKFMPPPTYTEVDPCILNNNVQ" BASE COUNT 328 a 295 c 323 g 325 t ORIGIN 1 ggggtttcct cgatttggag cttttttttt cttccaccgt catttctaac tcttaaaacc 61 aactcagttc catcatggtg atgttcaaga agatcaagtc ttttgaggtg gtctttaacg 121 accctgaaaa ggtgtacggc agtggcgaga aggtggctgg ccgggtgata gtggaggtgt 181 gtgaagttac tcgtgtcaaa gccgttagga tcctggcttg cggagtggct aaagtgcttt 241 ggatgcaggg atcccagcag tgcaaacaga cttcggagta cctgcgctat gaagacacgc 301 ttcttctgga agaccagcca acaggtgaga atgagatggt gatcatgaga cctggaaaca 361 aatatgagta caagttcggc tttgagcttc ctcaggggcc tctgggaaca tccttcaaag 421 gaaaatatgg gtgtgtagac tactgggtga aggcttttct tgaccgcccg agccagccaa 481 ctcaagagac aaagaaaaac tttgaagtag tggatctggt ggatgtcaat acccctgatt 541 taatggcacc tgtgtctgct aaaaaagaaa agaaagtttc ctgcatgttc attcctgatg 601 ggcgggtgtc tgtctctgct cgaattgaca gaaaaggatt ctgtgaaggt gatgagattt 661 ccatccatgc tgactttgag aatacatgtt cccgaattgt ggtccccaaa gctgccattg 721 tggcccgcca cacttacctt gccaatggcc agaccaaggt gctgactcag aagttgtcat 781 cagtcagagg caatcatatt atctcaggga catgcgcatc atggcgtggc aagagccttc 841 gggttcagaa gatcaggcct tctatcctgg gctgcaacat ccttcgagtt gaatattcct 901 tactgatcta tgttagcgtt cctggatcca agaaggtcat ccttgacctg cccctggtaa 961 ttggcagcag atcaggtcta agcagcagaa catccagcat ggccagccga accagctctg 1021 agatgagttg ggtagatctg aacatccctg ataccccaga agctcctccc tgctatatgg 1081 atgtcattcc tgaagatcac cgattggaga gcccaaccac tcctctgcta gatgacatgg 1141 atggctctca agacagccct atctttatgt atgcccctga gttcaagttc atgccaccac 1201 cgacttatac tgaggtggat ccctgcatcc tcaacaacaa tgtgcagtga gcatgtggaa 1261 gaaaagaagc a //