LOCUS BC093704 1271 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens thioredoxin interacting protein, mRNA (cDNA clone
MGC:120739 IMAGE:7939549), complete cds.
ACCESSION BC093704
VERSION BC093704.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1271)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1271)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 1 Row: d Column: 11.
FEATURES Location/Qualifiers
source 1..1271
/db_xref="H-InvDB:HIT000334679"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120739 IMAGE:7939549"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCTCGCT"
gene 1..1271
/gene="TXNIP"
/gene_synonym="EST01027"
/gene_synonym="HHCPA78"
/gene_synonym="THIF"
/gene_synonym="VDUP1"
/db_xref="GeneID:10628"
/db_xref="HGNC:HGNC:16952"
/db_xref="MIM:606599"
CDS 75..1250
/gene="TXNIP"
/gene_synonym="EST01027"
/gene_synonym="HHCPA78"
/gene_synonym="THIF"
/gene_synonym="VDUP1"
/codon_start=1
/product="thioredoxin interacting protein"
/protein_id="AAH93704.1"
/db_xref="GeneID:10628"
/db_xref="HGNC:HGNC:16952"
/db_xref="MIM:606599"
/translation="MVMFKKIKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAV
RILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFG
FELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQETKKNFEVVDLVDVNTPDLMAPV
SAKKEKKVSCMFIPDGRVSVSARIDRKGFCEGDEISIHADFENTCSRIVVPKAAIVAR
HTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCNILRVEYSL
LIYVSVPGSKKVILDLPLVIGSRSGLSSRTSSMASRTSSEMSWVDLNIPDTPEAPPCY
MDVIPEDHRLESPTTPLLDDMDGSQDSPIFMYAPEFKFMPPPTYTEVDPCILNNNVQ"
BASE COUNT 328 a 295 c 323 g 325 t
ORIGIN
1 ggggtttcct cgatttggag cttttttttt cttccaccgt catttctaac tcttaaaacc
61 aactcagttc catcatggtg atgttcaaga agatcaagtc ttttgaggtg gtctttaacg
121 accctgaaaa ggtgtacggc agtggcgaga aggtggctgg ccgggtgata gtggaggtgt
181 gtgaagttac tcgtgtcaaa gccgttagga tcctggcttg cggagtggct aaagtgcttt
241 ggatgcaggg atcccagcag tgcaaacaga cttcggagta cctgcgctat gaagacacgc
301 ttcttctgga agaccagcca acaggtgaga atgagatggt gatcatgaga cctggaaaca
361 aatatgagta caagttcggc tttgagcttc ctcaggggcc tctgggaaca tccttcaaag
421 gaaaatatgg gtgtgtagac tactgggtga aggcttttct tgaccgcccg agccagccaa
481 ctcaagagac aaagaaaaac tttgaagtag tggatctggt ggatgtcaat acccctgatt
541 taatggcacc tgtgtctgct aaaaaagaaa agaaagtttc ctgcatgttc attcctgatg
601 ggcgggtgtc tgtctctgct cgaattgaca gaaaaggatt ctgtgaaggt gatgagattt
661 ccatccatgc tgactttgag aatacatgtt cccgaattgt ggtccccaaa gctgccattg
721 tggcccgcca cacttacctt gccaatggcc agaccaaggt gctgactcag aagttgtcat
781 cagtcagagg caatcatatt atctcaggga catgcgcatc atggcgtggc aagagccttc
841 gggttcagaa gatcaggcct tctatcctgg gctgcaacat ccttcgagtt gaatattcct
901 tactgatcta tgttagcgtt cctggatcca agaaggtcat ccttgacctg cccctggtaa
961 ttggcagcag atcaggtcta agcagcagaa catccagcat ggccagccga accagctctg
1021 agatgagttg ggtagatctg aacatccctg ataccccaga agctcctccc tgctatatgg
1081 atgtcattcc tgaagatcac cgattggaga gcccaaccac tcctctgcta gatgacatgg
1141 atggctctca agacagccct atctttatgt atgcccctga gttcaagttc atgccaccac
1201 cgacttatac tgaggtggat ccctgcatcc tcaacaacaa tgtgcagtga gcatgtggaa
1261 gaaaagaagc a
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