LOCUS BC093671 824 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens small nuclear ribonucleoprotein 35kDa (U11/U12), mRNA
(cDNA clone MGC:120706 IMAGE:7939516), complete cds.
ACCESSION BC093671
VERSION BC093671.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 824)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 824)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 1 Row: c Column: 2.
FEATURES Location/Qualifiers
source 1..824
/db_xref="H-InvDB:HIT000334646"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120706 IMAGE:7939516"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCCAACTT"
gene 1..824
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
CDS 51..806
/gene="SNRNP35"
/gene_synonym="HM-1"
/gene_synonym="U1SNRNPBP"
/codon_start=1
/product="small nuclear ribonucleoprotein 35kDa (U11/U12)"
/protein_id="AAH93671.1"
/db_xref="GeneID:11066"
/db_xref="HGNC:HGNC:30852"
/translation="MKPANMNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARY
VPNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFI
EYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRF
GGRDRPFRKPINLPVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGREKRWQE
REPTRVWPDNDWERERDFRDDRIKGREKKERGK"
BASE COUNT 244 a 178 c 260 g 142 t
ORIGIN
1 acctaatgct gccggggagg aagtgcacct agaaagatta atgagaaaca atgaaaccag
61 ctaacatgaa cgattggatg cccatcgcca aggagtatga tccactcaaa gcgggcagca
121 ttgatggcac cgatgaagac ccacacgacc gcgcggtctg gagggcaatg ctggcacgat
181 atgtccccaa caaaggtgtc ataggagatc ccctcctcac cctgtttgtg gccagactaa
241 acttgcagac caaggaggac aaattaaagg aagtcttttc ccgctatggt gacatccggc
301 ggcttcggct ggtcagggac ttggtcacag gtttttcaaa gggctacgcc ttcatcgaat
361 acaaggagga gcgtgccgtg atcaaagctt accgagatgc tgatggcctg gttattgacc
421 agcatgagat atttgtggac tacgagctgg aaaggactct caaagggtgg atccctcggc
481 gacttggagg cggtcttggg ggaaaaaagg agtctgggca actgagattt gggggacggg
541 accggccttt tcgaaaacct attaacttgc cagttgttaa aaacgacctc tatagagagg
601 gaaaacggga aaggcgggag cgatctcgat cccgagaaag acactgggac tcgaggacaa
661 gggatcgaga ccatgacagg ggccgggaga agagatggca agaaagagag ccgaccaggg
721 tgtggcccga caatgactgg gagagagaga gggacttcag agatgacagg atcaagggga
781 gggagaagaa ggaaagaggc aagtagaggc ccaacagcag aacc
//