LOCUS BC093446 6144 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens cDNA clone IMAGE:3947250,
containing frame-shift errors.
ACCESSION BC093446
VERSION BC093446.1
KEYWORDS HTC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 6144)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6144)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455426
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..6144
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Ovary, adenocarcinoma"
/db_xref="taxon:32630"
/clone="IMAGE:3947250"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 1828 a 1426 c 1234 g 1656 t
ORIGIN
1 gcttcctccc gacgccggcg ccgctttctg gaaggttcgt gaaggcagtg agggcttacc
61 gttattacac tgcggccggc cagaatccgg gtccatccgt ccttcccgag ccaacccaga
121 cacagcggag tttgccatgc ccgagaatgt ggcaccccgg agcggggcga ctgccggggc
181 tgccggcggc cgcgggaaag gcgcctatca ggaccgcgac aagccagccc agatccgctt
241 cagcaacatt tccgccgcca aagcggttgc tgatgctatt agaacaagcc ttggaccaaa
301 aggaatggat aaaatgattc aagatggaaa aggtgatgta accattacaa atgatggtgc
361 taccattctg aaacaaatgc aagtattaca tccagcagcc agaatgctgg tggagctgtc
421 taaggctcaa gatatagaag caggagatgg caccacatca gtagtcatca ttgctggctc
481 cctcttagat tcttgtacca agcttcttca gaaagggatt catccaacca tcatttctga
541 gtcattccag aaggccctgg aaaagggcat tgaaatcttg actgacatgt ctcgacctgt
601 ggaactgagt gacagagaaa ctttgttaaa tagtgcaacc acttcactga actcaaaggt
661 ggtttctcag tattcaagtc tgctttctcc aatgagtgta aatgcagtga tgaaagtgat
721 tgacccagcc acagccacca gtgtagatct tagagatatt aaaatagtta agaagcttgg
781 tgggacaatt gatgactgtg agttggtgga agggctggtt ctcacccaaa aagtgtcaaa
841 ttctggcata accagagttg aaaaggccaa gattgggctt attcagtttt gcttatctgc
901 tcccaaaaca gacatggata atcaaatagt ggtttctgac tatgcccaga tggaccgagt
961 gctgcgagaa gagagagcct atattttaaa tttagtgaag caaattaaaa aaacaggatg
1021 taatgtcctt ctcatacaga aatctattct aagagatgct cttagtgatc ttgcattaca
1081 ctttctgaat aaaatgaaga taatggtgat taaggatatt gaaagagaag acattgaatt
1141 catttgtaag acaattggaa ccaagccagt tgctcatatt gaccaattta ctgctgacat
1201 gctgggttct gctgagttag ctgaggaggt caatttaaat ggttctggca aactgctcaa
1261 gattacaggc tgtgccagcc ctggaaaaac agttacaatt gttgttcgtg gttctaacaa
1321 actggtgatt gaagaagctg agcgctccat tcatgatgcc ctatgtgtta ttcgttgttt
1381 agtgaagaag agggctctta ttgcaggagg tggtgctcca gaaatagagt tggccctacg
1441 attaactgaa tattcacgaa cactgagtgg tatggaatcc tactgcgttc gtgcttttgc
1501 agatgctatg gaggtcattc catctacact agctgaaaat gccggcctga atcccatttc
1561 tacagtaaca gaactaagaa accggcatgc ccagggagaa aaaaactgca ggcattaatg
1621 tccgaaaggg tggtatttcc aacattttgg aggaactggt tgtccagcct ctgttggtat
1681 cagtcagtgc tctgactctt gcaactgaaa ctgttcggag cattctgaaa atagatgatg
1741 tggtaaacac tcgataatct ggataactga ctagcaccat tatgatcacc agtattgtgg
1801 ctggaatgga agaagatcac cttggtgttc cttgtttgga agattatttc ctctgaattt
1861 ctgggcttgg tcttccagtt ggcatttgcc tgaagttgta ttgaaacaat ttaatgaaaa
1921 tattaaatat ttggtttcaa aaggcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 ctcgagtttt tttttttttt tttttttaaa aataatattt aaatttattg tttcacatta
2101 gtttgaataa agcacaagcc aagatggttt aaatatcatt tgcagatgtc caagcttctt
2161 tacaattaca ggtcatgggc atcatcaacc tagtccttga cttgcagcta aaaaaggcaa
2221 aaggtctgtg tgaagtgaca gaagagcaca ccctactcat gtcatgagca aggaatcaaa
2281 gtcgaagaac agtaacagtc ttgacatcag cactgtaaga attactctgc agtaaactcc
2341 aacccagaat ggggaagaat actgaattag ctgagcacat tctggacaca attctgacca
2401 atttcagtct catgatctct gttggagcag gtttcattct ccaattctct tttacagaac
2461 agcagaactc gagccttcat aaaagtgatt aacggccttt ccgcttcttc atttttcctc
2521 cagccacctt gttcctgaca ccaatagcac cctctgtgtc atcattatct ccagcatcct
2581 ctcgcgagcg tttcttcttt tctccatgct cccttaactc cattcgggca aacctttggg
2641 cttcagcgac gcgttctgtc agcatcataa cctcatcatc ctgtgttgga aaacctggta
2701 gtttcttccc aattaagtgt tctatgcgct ggaagagttc cacatcatac tgtgtgacaa
2761 aagtaatagc ctttccggag cgcccagctc tagctgttcg acctactcga tggatgtaat
2821 ccttggaatg ggtaggaatg tcaaagttga caaccacatc tacatgaggt atgtccaaac
2881 ctcggctggc aacgtcagtt gctagaagaa tggaacgggc cttggcctta aacttattaa
2941 gggatcctag gcgcttactc tgactcattt gtccatggag ggggatggca gtgaagccaa
3001 gatttcgcag tagcaaagct gttctctggg tattattaca ggtgctgcag aatatcataa
3061 aggagtttcc agccaattca tttagaatat aaaccaggta ggtatccttg aatttagagg
3121 gaataaaaat ataatattgc tgtaattttt caactgtctg gtatttagag gaaacggcac
3181 atttcacagg attcttcaga gctgctcgct gaagtttttg aaccttcttg gtcatggtgg
3241 cagagaagag gaatgttttc cgatctcgag gaatcacttt gaggatcttg tcaacctctg
3301 tctcaaaatc catattcagt attcggtcgg cttcatccat gaccaagtat ttgagagctc
3361 tcaagttgaa acctttcgta ttttccaagt ggtcaatcag tcgaccagga gttgctatta
3421 ttatatgtgg tttttttgca agggccaaag attgagacat tgaatcaatt ccacctacaa
3481 tcacagcact ctgcactcca atagaggacc ccagggcttc aaactgctct gagatctgaa
3541 aggccagctc ccgagtcggg gtaagaacta gggcaaacaa acgctgcggg gtctccagca
3601 gtgcgtttag aatgggcaaa gcaaaggcgc ctgtctttcc agagccagtt tctgcaagcc
3661 caatgatatc acgaccttgt aaggccaaag gaatagcttc aatctgaatc ttggtgggtt
3721 ttgtccatcc caactggtca caagcttcac acaacacatc tgtcacaccc aggtctttaa
3781 atgttttagt ttcctcctct tccacaatcg gctgggacgc ttcggtcgga gaatccctcg
3841 tgccgaattc ggcacgaggg taacacgaga aagcacatac caaggccacc acacaccacc
3901 tgtccaaaaa ggccttcgat acgggataat cctatttatt acctcagaag tttttttctt
3961 cgcaggattt ttctgagcct tttaccactc cagcctagcc cctacccccc aattaggagg
4021 gcactggccc ccaacaggca tcaccccgct aaatccccta gaagtcccac tcctaaacac
4081 atccgtatta ctcgcatcag gagtatcaat cacctgagct caccatagtc taatagaaaa
4141 caaccgaaac caaataattc aagcactgct tattacaatt ttactgggtc tctattttac
4201 cctcctacaa gcctcagagt acttcgagtc tcccttcacc atttccgacg gcatctacgg
4261 ctcaacattt tttgtagcca caggcttcca cggacttcac gtcattattg gctcaacttt
4321 cctcactatc tgcttcatcc aactaatatt tcactttaca tccaaacatc actttggctt
4381 cgaagccgcc gcctgatact ggcattttgt agatgtggtt tgactatttc tgtatgtctc
4441 catctattga tgagggtctt aaaaaaaaaa aaaaaaaact cgaaactagt tctctctctc
4501 tctctcctcc tggaagcggt gcgcaggctg cgggggcaag attgcggacc gctttctgct
4561 ctatgccatg gacagctatt ggcacagccg gtgcctcaag tgctcctgct gccaggcgca
4621 gctgggcgac atcggcacgt cctgttacac caaaagtggc atgatccttt gcagaaatga
4681 ctacattagg ttatttggaa atagcggtgc ttgcagcgct tgcggacagt cgattcctgc
4741 gagtgaactc gtcatgaggg cgcaaggcaa tgtgtatcat cttaagtgtt ttacatgctc
4801 tacctgccgg aatcgcctgg tcccgggaga tcggtttcac tacatcaatg gcagtttatt
4861 ttgtgaacat gatagaccta cagctctcat caatggccat ttgaattcac ttcagagcaa
4921 tccactactg ccagaccaga aggtctgcta aaaggtcaga gtaatgcaga atgcgtgcct
4981 tcatctcaga tttgttcatc acaggtggat cccatgtgtc ttcagtagac aagtcacctt
5041 tgtagctagc accagtgcca gctccatgcc attgcacctt ctttagtctt gattgccctt
5101 cccgcattta ttggtgtatt aaaatgactg aatatgaaca ttaaggactc catgaacctg
5161 ggctaatggg agactgtaga gaaaatgaaa aaagatccac cagaggacat cttggggagg
5221 gggagggagc tgggggggag ggaaatgact aatgaagcta attaaaagaa gcattcaaat
5281 ctgctttcta ccctcattaa caattagcag ggcactggcc agagtttgta ccctgtgttt
5341 taccttaaca acattctatt tgctctttgt atatttaagt gttgtaagga aacgtgtttc
5401 aatcaaaact gaccatgaga taaaggaaag agatgtggct tttgtgatat tctatcacaa
5461 acacttattg tatctctgta aaatacaatg tatgtatgca tgtaagtgtt tttgtcctaa
5521 tgttgctact cccatggcaa agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5581 aaactcagac tagttctctc tctcagctac gcaaaatctt agcatactcc tcaattaccc
5641 acataggatg aataatagca gttctaccgt acaaccctaa cataaccatt cttaatttaa
5701 ctatttatat tatcctaact actaccgcat tcctactact caacttaaac tccagcacca
5761 cgaccctact actatctcgc acctgaaaca agctaacatg actaacaccc ttaattccat
5821 ccaccctcct ctccctagga ggcctgcccc cgctaaccgg ctttttgccc aaatgggcca
5881 ttatcgaaga attcacaaaa aacaatagcc tcatcatccc caccatcata gccaccatca
5941 ccctccttaa cctctacttc tacctacgcc taatctactc cacctcaatc acactactcc
6001 ccatatctaa caacgtaaaa ataaaatgac agtttgaaca tacaaaaccc accccattcc
6061 tccccacact catcgccctt accacgctac tcctacctat ctcccctttt atactaataa
6121 tcttataaaa aaaaaaaaaa aaaa
//