LOCUS BC093100 1833 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens eukaryotic translation initiation factor 3, subunit D,
mRNA (cDNA clone MGC:111783 IMAGE:6527393), complete cds.
ACCESSION BC093100
VERSION BC093100.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1833)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1833)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238220.
FEATURES Location/Qualifiers
source 1..1833
/db_xref="H-InvDB:HIT000334591"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111783 IMAGE:6527393"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1833
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
CDS 40..1686
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/codon_start=1
/product="eukaryotic translation initiation factor 3,
subunit D"
/protein_id="AAH93100.1"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
/translation="MAKFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVAD
WTGATYQDKRYTNKYSSQFGGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQ
RNLRRDKDRRNMLQFNLQILPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDS
SVEVRSDWEVKEEMDFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDRITTRSEKPLR
SIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMSCTRSVYSWDIVVQRVGSKL
FFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQCLRMGKER
YNFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDGVMTGANGEVSFIN
IKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLG
YVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLI
LKDPNKQVIRVYSLPDGTFSSDEDEEEEEEEEEEEEEEET"
BASE COUNT 516 a 437 c 485 g 395 t
ORIGIN
1 gccatcccgg ccggccgagg ccattgcaga ttttggaaga tggcaaagtt catgacaccc
61 gtgatccagg acaacccctc aggctggggt ccctgtgcgg ttcccgagca gtttcgggat
121 atgccctacc agccgttcag caaaggagat cggctaggaa aggttgcaga ctggacagga
181 gccacatacc aagataagag gtacacaaat aagtactcct ctcagtttgg tggtggaagt
241 caatatgctt atttccatga ggaggatgaa agtagcttcc agctggtgga tacagcgcgc
301 acacagaaga cggcctacca gcggaatcga atgagatttg cccagaggaa cctccgcaga
361 gacaaagatc gtcggaacat gttgcagttc aacctgcaga tcctgcctaa gagtgccaaa
421 cagaaagaga gagaacgcat tcgactgcag aaaaagttcc agaaacaatt tggggttagg
481 cagaaatggg atcagaaatc acagaaaccc cgagactctt cagttgaagt tcgtagtgat
541 tgggaagtga aagaggaaat ggattttcct cagttgatga agatgcgcta cttggaagta
601 tcagagccac aggacattga gtgttgtggg gccctagaat actacgacaa agcctttgac
661 cgcatcacca cgaggagtga gaagccactg cggagcatca agcgcatctt ccacactgtc
721 accaccacag acgaccctgt catccgcaag ctggcaaaaa ctcaggggaa tgtgtttgcc
781 actgatgcca tcctggccac gctgatgagc tgtacccgct cagtgtattc ctgggatatt
841 gtcgtccaga gagttgggtc caaactcttc tttgacaaga gagacaactc tgactttgac
901 ctcctgacag tgagtgagac tgccaatgag ccccctcaag atgaaggtaa ttccttcaat
961 tcaccccgca acctggccat ggaggcaacc tacatcaacc acaatttctc ccagcagtgc
1021 ttgagaatgg ggaaggaaag atacaacttc cccaacccaa acccgtttgt ggaggacgac
1081 atggataaga atgaaatcgc ctctgttgcg taccgttacc gcaggtggaa gcttggagat
1141 gatattgacc ttattgtccg ttgtgagcac gatggcgtca tgactggagc caacggggaa
1201 gtgtccttca tcaacatcaa gacactcaat gagtgggatt ccaggcactg taatggcgtt
1261 gactggcgtc agaagctgga ctctcagcga ggggctgtca ttgccacgga gctgaagaac
1321 aacagctaca agttggcccg gtggacctgc tgtgctttgc tggctggatc tgagtacctc
1381 aagcttggtt atgtgtctcg gtaccacgtg aaagactcct cacgccacgt catcctaggc
1441 acccagcagt tcaagcctaa tgagtttgcc agccagatca acctgagcgt ggagaatgcc
1501 tggggcattt tacgctgcgt cattgacatc tgcatgaagc tggaggaggg caaatacctc
1561 atcctcaagg accccaacaa gcaggtcatc cgtgtctaca gcctccctga tggcaccttc
1621 agctctgatg aagatgagga ggaagaggag gaggaagaag aggaagaaga agaggaagaa
1681 acttaaacca gtgatgtgga gctggagttt gtccttccac cgagactacg agggcctttg
1741 atgcttagtg gaatgtgtgt ctaacttgct ctctgacatt tagcagatga aataaaatat
1801 atatctgttt agtctttcaa aaaaaaaaaa aaa
//