LOCUS BC093096 909 bp mRNA linear HUM 20-MAY-2005
DEFINITION Homo sapiens polycystic kidney and hepatic disease 1 (autosomal
recessive)-like 1, mRNA (cDNA clone IMAGE:30330124), partial cds.
ACCESSION BC093096
VERSION BC093096.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 909)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 909)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377831.
FEATURES Location/Qualifiers
source 1..909
/db_xref="H-InvDB:HIT000334587"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30330124"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>909
/gene="PKHD1L1"
/gene_synonym="DKFZp586C1021"
/gene_synonym="PKHDL1"
/db_xref="GeneID:93035"
/db_xref="MIM:607843"
CDS 76..>909
/gene="PKHD1L1"
/gene_synonym="DKFZp586C1021"
/gene_synonym="PKHDL1"
/codon_start=1
/product="PKHD1L1 protein"
/protein_id="AAH93096.1"
/db_xref="GeneID:93035"
/db_xref="MIM:607843"
/translation="MGHLWLLGIWGLCGLLLCAADPSTDGSQIIPKVTEIIPKYGSIN
GATRLTIRGEGFSQANQFNYGVDNAELGNSVQLISSFQSITCDVEKDASHSTQITCYT
RAMPEDSYTVRVSVDGVPVTENNTCKGHINSWECTFNAKSFRTPTIRSITPLSGTPGT
LITIQGRIFTDVYGSNIALSSNGKNVRILRVYIGGMPCELLIPQSDNLYGLKLDHPNG
DMGSMVCKTTGTFIGHHNVSFILDNDYGRSFPQKMAYFVSSLNKIAMFQTKKKKKKKK
KK"
BASE COUNT 303 a 179 c 191 g 236 t
ORIGIN
1 agtcccagga gccgagctcc agcactagag ccagctgcga gcggagggca ccaactccgc
61 agaactggct tttcaatggg acacctgtgg ctcctgggta tttggggcct ctgtgggctg
121 ctcctgtgtg ccgcggatcc cagcacagat ggctctcaaa taatccccaa agtcacagaa
181 ataataccta aatatggcag tataaatgga gcaacaaggc tgactataag aggggaaggt
241 ttttctcaag caaaccagtt taactatgga gttgataacg ctgagttggg aaacagtgtg
301 caattaattt cttctttcca gtcaattact tgtgatgtag aaaaagatgc aagtcattca
361 actcaaatta catgctatac tagagcaatg ccggaagatt cctacactgt tagagtcagt
421 gtggacgggg ttcctgttac ggaaaataac acctgcaaag gtcacatcaa cagctgggaa
481 tgtaccttca acgcaaaaag ttttagaacc ccaacaataa gaagcatcac acctttatct
541 ggaactccag gtacactaat aacaatccaa ggcagaatct tcactgatgt ctatggaagt
601 aatattgcac taagctcaaa tgggaaaaat gttaggattt tgagagttta cattggagga
661 atgccctgtg agcttctcat accacaatct gataatttat atggtctaaa actggatcat
721 ccaaatggag atatgggttc tatggtttgt aagacgactg gaacttttat tggtcatcac
781 aatgtcagct tcatcttaga taatgattat ggaaggagtt ttccacagaa aatggcatat
841 tttgtttctt ctctcaataa aattgcaatg tttcaaacca aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaaa
//