LOCUS BC093049 1479 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens four and a half LIM domains 2, mRNA (cDNA clone
MGC:111118 IMAGE:30374919), complete cds.
ACCESSION BC093049
VERSION BC093049.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: e Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42403569.
FEATURES Location/Qualifiers
source 1..1479
/db_xref="H-InvDB:HIT000334540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111118 IMAGE:30374919"
/tissue_type="White Matter pool- 5 brain tissues- femoral
artery, olfactory tract, optic tract, cerebellar white
matter, cerebral white matter."
/clone_lib="NIH_MGC_181"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1479
/gene="FHL2"
/gene_synonym="AAG11"
/gene_synonym="DRAL"
/gene_synonym="SLIM3"
/db_xref="GeneID:2274"
/db_xref="HGNC:HGNC:3703"
/db_xref="MIM:602633"
CDS 166..1005
/gene="FHL2"
/gene_synonym="AAG11"
/gene_synonym="DRAL"
/gene_synonym="SLIM3"
/codon_start=1
/product="four and a half LIM domains 2"
/protein_id="AAH93049.2"
/db_xref="GeneID:2274"
/db_xref="HGNC:HGNC:3703"
/db_xref="MIM:602633"
/translation="MTERFDCHHCNESLFGKKYILREESPYCVVCFETLFANTCEECG
KPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQ
ECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAM
QCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYA
KKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCG
KDI"
BASE COUNT 383 a 373 c 374 g 349 t
ORIGIN
1 ccgctgcggt gccgtgagta cctccaaccc cctgcgcccc ggagggaggc cgaggggctt
61 agccaccagg gctcggaagt gggggccgaa tccggtgcga gacccaagga gaggggagca
121 gagccggagt tggggagact ggttgctgaa aagccaggag tcaaaatgac tgagcgcttt
181 gactgccacc attgcaacga atctctcttt ggcaagaagt acatcctgcg ggaggagagc
241 ccctactgcg tggtgtgctt tgagaccctg ttcgccaaca cctgcgagga gtgtgggaag
301 cccatcggct gtgactgcaa ggacttgtct tacaaggacc ggcactggca tgaagcctgt
361 ttccactgct cgcagtgcag aaactcactg gtggacaagc cctttgctgc caaggaggac
421 cagctgctct gtacagactg ctattccaac gagtactcat ccaagtgcca ggaatgcaag
481 aagaccatca tgccaggtac ccgcaagatg gagtacaagg gcagcagctg gcatgagacc
541 tgcttcatct gccaccgctg ccagcagcca attggaacca agagtttcat ccccaaagac
601 aatcagaatt tctgtgtgcc ctgctatgag aaacaacatg ccatgcagtg cgttcagtgc
661 aaaaagccca tcaccacggg aggggtcact taccgggagc agccctggca caaggagtgc
721 ttcgtgtgca ccgcctgcag gaagcagctg tctgggcagc gcttcacagc tcgcgatgac
781 tttgcctact gcctgaactg cttctgtgac ttgtatgcca agaagtgtgc tgggtgcacc
841 aaccccatca gcggacttgg tggcacaaaa tacatctcct ttgaggaacg gcagtggcat
901 aacgactgct ttaactgtaa gaagtgctcc ctctcactgg tggggcgtgg cttcctcaca
961 gagagggatg acatcctgtg ccccgactgt gggaaagaca tctgaattca acacagagaa
1021 gttgctgctt gtgatctcac acacagattt ttatgttttc tttctcaccc aggcaatctt
1081 gccttctggt ttcttccagc cacattgaga ctttcttcta gtgcttttca gtgatactca
1141 cgtttgctta aaccctttag tgctttgtga tagttcagtc ccagggaaag agaaaactcg
1201 ccctaggccc taggtgggaa gatggtttga aatttttgta atcgagtaag gcacacccaa
1261 atgtaaaaat ccttttgaat gatgccttta taaatctttc tctcactgtc tatttaagtg
1321 caattaacat atgtcacgaa cttgaaagtt ttctaaactc aataaggtaa tgaccagttg
1381 ttatttacag ctctgtaacc tcccgttgcg tcaagtctaa accaagatta tgtgacttgc
1441 aataaagtta ttcagaacag aaaaaaaaaa aaaaaaaaa
//