LOCUS BC093047 1491 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CD81 molecule, mRNA (cDNA clone MGC:111086
IMAGE:30398483), complete cds.
ACCESSION BC093047
VERSION BC093047.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: k Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62240999.
FEATURES Location/Qualifiers
source 1..1491
/db_xref="H-InvDB:HIT000334538"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111086 IMAGE:30398483"
/tissue_type="White Matter pool- 5 brain tissues- femoral
artery, olfactory tract, optic tract, cerebellar white
matter, cerebral white matter."
/clone_lib="NIH_MGC_181"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1491
/gene="CD81"
/gene_synonym="S5.7"
/gene_synonym="TSPAN28"
/db_xref="GeneID:975"
/db_xref="HGNC:HGNC:1701"
/db_xref="MIM:186845"
CDS 232..942
/gene="CD81"
/gene_synonym="S5.7"
/gene_synonym="TSPAN28"
/codon_start=1
/product="CD81 molecule"
/protein_id="AAH93047.1"
/db_xref="GeneID:975"
/db_xref="HGNC:HGNC:1701"
/db_xref="MIM:186845"
/translation="MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTNL
LYLELGDKPAPNTFYVGIYILIAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILF
ACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVVDDDANNAKAVVKTFHETLDCCGSS
TLTALTTSVLKNNLCPSGSNIISNLFKEDCHQKIDDLFSGKLYLIGIAAIVVAVIMIF
EMILSMVLCCGIRNSSVY"
BASE COUNT 263 a 504 c 409 g 315 t
ORIGIN
1 gcgagcgcgc aacggcggcg acggcggcga ccccaccgcg catcctgcca ggcctccggc
61 gcccagcgcc ccacgcgccc ccgcgccccc gcgcccccgc gcccctttct tcgcgccccc
121 gcccctcggc ccgccaggcc cccttgccgg ccacccgcca ggccccgcgc cggcccgccc
181 gccgcccagg accggcccgc gccccgcagg ccgcccgccg cccgcgccgc catgggagtg
241 gagggctgca ccaagtgcat caagtacctg ctcttcgtct tcaatttcgt cttctggctg
301 gctggaggcg tgatcctggg tgtggccctg tggctccgcc atgacccgca gaccaccaac
361 ctcctgtatc tggagctggg agacaagccc gcgcccaaca ccttctatgt aggcatctac
421 atcctcatcg ctgtgggcgc tgtcatgatg ttcgttggct tcctgggctg ctacggggcc
481 atccaggaat cccagtgcct gctggggacg ttcttcacct gcctggtcat cctgtttgcc
541 tgtgaggtgg ccgccggcat ctggggcttt gtcaacaagg accagatcgc caaggatgtg
601 aagcagttct atgaccaggc cctacagcag gccgtggtgg atgatgacgc caacaacgcc
661 aaggctgtgg tgaagacctt ccacgagacg cttgactgct gtggctccag cacactgact
721 gctttgacca cctcagtgct caagaacaat ttgtgtccct cgggcagcaa catcatcagc
781 aacctcttca aggaggactg ccaccagaag atcgatgacc tcttctccgg gaagctgtac
841 ctcatcggca ttgctgccat cgtggtcgct gtgatcatga tcttcgagat gatcctgagc
901 atggtgctgt gctgtggcat ccggaacagc tccgtgtact gaggccccgc agctctggcc
961 acagggacct ctgcagtgcc ccctaagtga cccggacact tccgaggggg ccatcaccgc
1021 ctgtgtatat aacgtttccg gtattactct gctacacgta gcctttttac ttttggggtt
1081 ttgtttttgt tctgaacttt cctgttacct tttcagggct gacgtcacat gtaggtggcg
1141 tgtatgagtg gagacgggcc tgggtcttgg ggactggagg gcaggggtcc ttctgccctg
1201 gggtcccagg gtgctctgcc tgctcagcca ggcctctcct gggagccact cgcccagaga
1261 ctcagcttgg ccaacttggg gggctgtgtc cacccagccc gcccgtcctg tgggctgcac
1321 agctcacctt gttccctcct gccccggttc gagagccgag tctgtgggca ctctctgcct
1381 tcatgcacct gtcctttcta acacgtcgcc ttcaactgta atcacaacat cctgactccg
1441 tcatttaata aagaaggaac atcaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//