LOCUS BC093035 2147 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens Rho-related BTB domain containing 1, mRNA (cDNA clone
IMAGE:30336332), complete cds.
ACCESSION BC093035
VERSION BC093035.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2147)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2147)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: g Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38201616
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2147
/db_xref="H-InvDB:HIT000334526"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30336332"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2147
/gene="RHOBTB1"
/gene_synonym="KIAA0740"
/gene_synonym="MGC33059"
/gene_synonym="MGC33841"
/db_xref="GeneID:9886"
/db_xref="MIM:607351"
CDS 277..576
/gene="RHOBTB1"
/gene_synonym="KIAA0740"
/gene_synonym="MGC33059"
/gene_synonym="MGC33841"
/codon_start=1
/product="RHOBTB1 protein"
/protein_id="AAH93035.1"
/db_xref="GeneID:9886"
/db_xref="MIM:607351"
/translation="MDADMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQ
LLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGR"
BASE COUNT 637 a 398 c 437 g 675 t
ORIGIN
1 ggcgggaccc agagccgccg cgggagcttc cagcgtcccc aggttttata ataatcaaga
61 agcacatgaa agaggcctct tcatcaagca ttcttgacta agttatgaaa atggaattga
121 agtttatttt cccccttcat atggtaagtc cagctgtgag cagagtgttc tgttcttcac
181 ttccagcaag ccagaactct tctatccata ggccaaccta tgttgcagtt gattaagggg
241 tgcagctccc atataaatgc tggcagagtt tcataaatgg acgctgacat ggactacgaa
301 agacccaacg ttgaaactat caaatgtgtg gtcgtgggtg acaatgccgt ggggaagacg
361 cgcttgatct gtgccagggc gtgcaacacc acactcacgc agtatcagct gctggccacc
421 cacgtgccaa cagtgtgggc gattgaccag taccgcgtgt gccaggaggt cttggagcgt
481 tctcgggatg ttgttgatga agtgagtgtt tctctcaggc tttgggatac ttttggtgat
541 catcacaaag acagacgctt tgcatatggc aggtaaacca agactagtac agcgtggttg
601 agcttgaatg caatttcctt ttcaaaacca gcagcgggtt tacaaatcaa caaaaaccac
661 atcatatggc cttgaaatgt gctgggttct gcactgtgtc taagaaaagg aaaagaaaaa
721 aaaatggtat tgtttcctga tgtcaagaaa agaagcgtgc cctgccaatg aggaagtact
781 gtgttgaaaa caaccagtgg tcaagctgga aggtttgcta gattaggatt ctgtaacacc
841 ctccaactgc gggctgcttt gattgctggt tctctgagta acacttcact tgccttctgt
901 tagaatgttt taagttattt tggcacttgg tcaccctact tcagaaagac tgtttggtct
961 tttcatgacc atattggcag agtctaatgt tatttgcttt ggattttgtg ttatctgaaa
1021 agtctattat ttttattaga aggtcatttt taaaaagaaa gaaaaatatc tccaaagtcc
1081 ttcgcaagac atatttccaa aatgaacaga aacactaacg tttatttttt taaaaaggag
1141 aaaaaaatct agtaatggga aaactcctct agaaggacat taatatgggt aggaacatgg
1201 tcaaagtgcc ttaaaatatt tagcaacctc tccttgccac cataacttaa cgtctctctc
1261 aatgaatggg ttatagctgt taaattctgt attaatggag actttttttt taccacttaa
1321 ttataaatga acacatttca ttttcagtgt agaacgtaga tatcatggcc ttgttgtctc
1381 ttcttaacat caaacatcat atcaccttac aggattttat tagttaggta ctccaagcac
1441 gtgaattact ccttggtatt gagataagca tttctgaaga ttcttctatt tctacaagcc
1501 agtagctctt tgaacggact tttattgtca tttatctaag tggcctaaaa taatgaataa
1561 actgctgaaa gagtttgccc tattcccagg aattatttca cacactgaaa gaatctgtga
1621 cttagaccac tttctttcaa ggggactcag agagttatgg aagcaaaaca cgattttaat
1681 gtccccttgg taacaaggac ttttgaactt agtatcctac atcatagata gttttctttt
1741 ccttgaattt cctggatttt ttttctttct ataatgttgt tgattgttat cttaggtgcc
1801 attttgcttt tttcttttgt ccaattgttc tacatgtaaa aataacaatt ataaatgaac
1861 ctgcttgtaa ctgctgggca gtcaggtttg taacacctat ggttttgagg aagcttgatt
1921 tgatgacttt aggcagtgta aggataaata cagtagattt caaaggactt ttttatatcc
1981 ccacttctaa aacagtgtca tgaaaatgat gagcctgatg atgagttaat ggaaatattt
2041 gggtttagaa tctagagact atttcaacag ctcagtggtt tgttgccact agaaatttat
2101 gcatttgtca atacctgtga aaaaataaca gaaaaaaaaa aaaaaaa
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