LOCUS BC093033 1473 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens secreted phosphoprotein 1, mRNA (cDNA clone MGC:110940
IMAGE:5288027), complete cds.
ACCESSION BC093033
VERSION BC093033.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1473)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38146097.
FEATURES Location/Qualifiers
source 1..1473
/db_xref="H-InvDB:HIT000334524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:110940 IMAGE:5288027"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1473
/gene="SPP1"
/gene_synonym="BSPI"
/gene_synonym="ETA-1"
/db_xref="GeneID:6696"
/db_xref="HGNC:HGNC:11255"
/db_xref="MIM:166490"
CDS 158..1021
/gene="SPP1"
/gene_synonym="BSPI"
/gene_synonym="ETA-1"
/codon_start=1
/product="secreted phosphoprotein 1"
/protein_id="AAH93033.1"
/db_xref="GeneID:6696"
/db_xref="HGNC:HGNC:11255"
/db_xref="MIM:166490"
/translation="MRIAVICFCLLGITCAIPVKQADSGSSEEKQNAVSSEETNDFKQ
ETLPSKSNESHDHMDDMDDEDDDDHVDSQDSIDSNDSDDVDDTDDSHQSDESHHSDES
DELVTDFPTDLPATEVFTPVVPTVDTYDGRGDSVVYGLRSKSKKFRRPDIQYPDATDE
DITSHMESEELNGAYKAIPVAQDLNAPSDWDSRGKDSYETSQLDDQSAETHSHKQSRL
YKRKANDESNEHSDVIDSQELSKVSREFHSHEFHSHEDMLVVDPKSKEEDKHLKFRIS
HELDSASSEVN"
BASE COUNT 468 a 283 c 320 g 402 t
ORIGIN
1 gttggtggag gatgtctgca gcagcattta aattctggga gggcttggtt gtcagcagca
61 gcaggaggag gcagagcaca gcatcgtcgg gaccagactc gtctcaggcc agttgcagcc
121 ttctcagcca aacgccgacc aaggaaaact cactaccatg agaattgcag tgatttgctt
181 ttgcctccta ggcatcacct gtgccatacc agttaaacag gctgattctg gaagttctga
241 ggaaaagcag aatgctgtgt cctctgaaga aaccaatgac tttaaacaag agacccttcc
301 aagtaagtcc aacgaaagcc atgaccacat ggatgatatg gatgatgaag atgatgatga
361 ccatgtggac agccaggact ccattgactc gaacgactct gatgatgtag atgacactga
421 tgattctcac cagtctgatg agtctcacca ttctgatgaa tctgatgaac tggtcactga
481 ttttcccacg gacctgccag caaccgaagt tttcactcca gttgtcccca cagtagacac
541 atatgatggc cgaggtgata gtgtggttta tggactgagg tcaaaatcta agaagtttcg
601 cagacctgac atccagtacc ctgatgctac agacgaggac atcacctcac acatggaaag
661 cgaggagttg aatggtgcat acaaggccat ccccgttgcc caggacctga acgcgccttc
721 tgattgggac agccgtggga aggacagtta tgaaacgagt cagctggatg accagagtgc
781 tgaaacccac agccacaagc agtccagatt atataagcgg aaagccaatg atgagagcaa
841 tgagcattcc gatgtgattg atagtcagga actttccaaa gtcagccgtg aattccacag
901 ccatgaattt cacagccatg aagatatgct ggttgtagac cccaaaagta aggaagaaga
961 taaacacctg aaatttcgta tttctcatga attagatagt gcatcttctg aggtcaatta
1021 aaaggagaaa aaatacaatt tctcactttg catttagtca aaagaaaaaa tgctttatag
1081 caaaatgaaa gagaacatga aatgcttctt tctcagttta ttggttgaat gtgtatctat
1141 ttgagtctgg aaataactaa tgtgtttgat aattagttta gtttgtggct tcatggaaac
1201 tccctgtaaa ctaaaagctt cagggttatg tctatgttca ttctatagaa gaaatgcaaa
1261 ctatcactgt attttaatat ttgttattct ctcatgaata gaaatttatg tagaagcaaa
1321 caaaatactt ttacccactt aaaaagagaa tataacattt tatgtcacta taatcttttg
1381 ttttttaagt tagtgtatat tttgttgtga ttatcttttt gtggtgtgaa taaatctttt
1441 atcttgaatg taataagaaa aaaaaaaaaa aaa
//