LOCUS BC093005 1756 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens speedy homolog A (Xenopus laevis), mRNA (cDNA clone
MGC:110856 IMAGE:4839330), complete cds.
ACCESSION BC093005
VERSION BC093005.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1756)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1756)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: c Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56961677.
FEATURES Location/Qualifiers
source 1..1756
/db_xref="H-InvDB:HIT000334496"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:110856 IMAGE:4839330"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1756
/gene="SPDYA"
/gene_synonym="Ringo3"
/gene_synonym="SPY1"
/db_xref="GeneID:245711"
/db_xref="HGNC:HGNC:30613"
CDS 133..1074
/gene="SPDYA"
/gene_synonym="Ringo3"
/gene_synonym="SPY1"
/codon_start=1
/product="SPDYA protein"
/protein_id="AAH93005.1"
/db_xref="GeneID:245711"
/db_xref="HGNC:HGNC:30613"
/translation="MRHNQMCCETPPTVTVYVKSGSNRSHQPKKPITLKRPICKDNWQ
AFEKNTHNNNKSKRPKGPCLVIQRQDMTAFFKLFDDDLIQDFLWMDCCCKIADKYLLA
MTFVYFKRAKFTISEHTRINFFIALYLANTVEEDEEETKYEIFPWALGKNWRKLFPNF
LKLRDQLWDRIDYRAIVSRRCCEEVMAIAPTHYIWQRERSVHHSGAVRNYNRDEVQLP
RGPSATPVDCSLCGKKRRYVRLGLSSSSSLSSHTAGVTEKHSQDSYNSLSMDIIGDPS
QAYTGSEVVNDHQSNKGKKTNFLKKDKSMEWFTGSEE"
BASE COUNT 592 a 308 c 333 g 523 t
ORIGIN
1 gggtaccgct gctggctagc gaccgacgag caaccgtctg aggccaggag cgctgcgacg
61 gagccttgac cgccgttgcc cggccctctc ccgcgcagcc ccgggcttcc gcaggaatat
121 tgggaaacca aaatgaggca caatcagatg tgttgtgaga caccacctac tgtcactgtt
181 tatgtaaaat cagggtcaaa tagatcacat cagcctaaaa agcccattac tctgaagcgt
241 cctatttgta aagataattg gcaagcattt gaaaaaaata cacataataa caacaaatct
301 aaacgcccca aaggaccttg tctggttata cagcgtcagg atatgactgc tttctttaaa
361 ttatttgatg acgatttaat tcaagatttc ttgtggatgg actgctgctg taaaattgca
421 gacaagtatc ttttggctat gacctttgtt tatttcaaga gggctaaatt tactataagt
481 gagcatacca ggataaattt ctttattgct ttgtatctgg ctaatacagt tgaagaagat
541 gaagaagaaa ccaagtacga aatttttcca tgggctttag ggaaaaactg gagaaaattg
601 ttccctaatt tcttaaagtt aagggaccag ctctgggata gaattgacta tagggctatt
661 gtaagcaggc gatgttgtga ggaggttatg gccattgcac caacccatta tatctggcaa
721 agagaacgtt ctgttcatca cagtggagct gtcagaaact acaacagaga tgaagttcag
781 ctgccccggg gacctagtgc cacaccagta gattgttcac tctgtggtaa aaaaagaaga
841 tatgttagac tgggattgtc ttcatcatca tctttatcca gtcatacagc aggggtgaca
901 gaaaaacatt ctcaggactc atacaactca ctgtcaatgg acataatagg tgatccttct
961 caagcttata ctggttctga agtagtcaat gaccatcaat caaataaagg aaagaaaact
1021 aatttcttga agaaagacaa atctatggag tggtttacag gaagtgaaga atgagatggc
1081 ccaactaaac caatttggaa tcattaacta caaaatgtca aactaactgc aagacaagtg
1141 tcaaaatggg atgtttaagc agttttgcta tgttatacat cttttagttg ttattttcaa
1201 aattatatgt ataagttata taagtaatag taatagctaa aaatgccaat ctatggaagc
1261 agtgattttc aatataaagt tctattttga tatttttcca tcttcaagtc agttactgtc
1321 atctggagta ctcagttaag ttgtggtttg accttcctca acttgacaag aaaagctaat
1381 ttaagagaag aaaaacataa agtcattata ttaattaaaa gaaaaaacac catttaatat
1441 gttctgaaaa cattactcac ctgtatgacc aggttgccag tgtactggtc tagcaacata
1501 gggaaatgat ccatatggaa aatcagaatg cgattcttct gttgtaaaaa aatatatgta
1561 ctataagcta cataaaatat tttctatttt tttcacaaaa ctgttaaaat atgagttact
1621 ctctttattg taagtttttt ctttatttat ttcctcgcat atgttttaga gctactctgc
1681 cagttattat acagaaacta tttgtcaatg attatgtaat aaacatatga ttttataacc
1741 aaaaaaaaaa aaaaaa
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