LOCUS BC092514 3508 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens conserved helix-loop-helix ubiquitous kinase, mRNA (cDNA clone MGC:104955 IMAGE:3063613), complete cds. ACCESSION BC092514 VERSION BC092514.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3508) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3508) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 199 Row: b Column: 24. FEATURES Location/Qualifiers source 1..3508 /db_xref="H-InvDB:HIT000334488" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:104955 IMAGE:3063613" /tissue_type="Lymph, normal germinal center B cells" /clone_lib="NIH_MGC_50" /lab_host="DH10B" /note="Vector: pT7T3-Pac" gene 1..3508 /gene="CHUK" /gene_synonym="IKBKA" /gene_synonym="IKK-alpha" /gene_synonym="IKK1" /gene_synonym="IKKA" /gene_synonym="NFKBIKA" /db_xref="GeneID:1147" /db_xref="HGNC:HGNC:1974" /db_xref="MIM:600664" CDS 17..2254 /gene="CHUK" /gene_synonym="IKBKA" /gene_synonym="IKK-alpha" /gene_synonym="IKK1" /gene_synonym="IKKA" /gene_synonym="NFKBIKA" /codon_start=1 /product="conserved helix-loop-helix ubiquitous kinase" /protein_id="AAH92514.1" /db_xref="GeneID:1147" /db_xref="HGNC:HGNC:1974" /db_xref="MIM:600664" /translation="MERPPGLRPGAGGPWEMRERLGTGGFGNVCLYQHRELDLKIAIK SCRLELSTKNRERWCHEIQIMKKLNHANVVKACDVPEELNILIHDVPLLAMEYCSGGD LRKLLNKPENCCGLKESQILSLLSDIGSGIRYLHENKIIHRDLKPENIVLQDVGGKII HKIIDLGYAKDVDQGSLCTSFVGTLQYLAPELFENKPYTATVDYWSFGTMVFECIAGY RLFLHHLQPFTWHEKIKKKDPKCIFACEEMSGEVRFSSHLPQPNSLCSLIVEPMENWL QLMLNWDPQQRGGPVDLTLKQPRCFVLMDHILNLKIVHILNMTSAKIISFLLPPDESL HSLQSRIERETGINTGSQELLSETGISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKT VYEGPFASRSLSDCVNYIVQDSKIQLPIIQLRKVWAEAVHYVSGLKEDYSRLFQGQRA AMLSLLRYNANLTKMKNTLISASQQLKAKLEFFHKSIQLDLERYSEQMTYGISSEKML KAWKEMEEKAIHYAEVGVIGYLEDQIMSLHAEIMELQKSPYGRRQGDLMESLEQRAID LYKQLKHRPSDHSYSDSTEMVKIIVHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPK VEVALSNIKEADNTVMFMQGKRQKEIWHLLKIACTQSSARSLVGSSLEGAVTPQTSAW LPPTSAEHDHSLSCVVTPQDGETSAQMIEENLNCLGHLSTIIHEANEEQGNSMMNLDW SWLTE" BASE COUNT 1098 a 614 c 739 g 1057 t ORIGIN 1 cttgccctcc cgccccatgg agcggccccc ggggctgcgg ccgggcgcgg gcgggccctg 61 ggagatgcgg gagcggctgg gcaccggcgg cttcgggaac gtctgtctgt accagcatcg 121 ggaacttgat ctcaaaatag caattaagtc ttgtcgccta gagctaagta ccaaaaacag 181 agaacgatgg tgccatgaaa tccagattat gaagaagttg aaccatgcca atgttgtaaa 241 ggcctgtgat gttcctgaag aattgaatat tttgattcat gatgtgcctc ttctagcaat 301 ggaatactgt tctggaggag atctccgaaa gctgctcaac aaaccagaaa attgttgtgg 361 acttaaagaa agccagatac tttctttact aagtgatata gggtctggga ttcgatattt 421 gcatgaaaac aaaattatac atcgagatct aaaacctgaa aacatagttc ttcaggatgt 481 tggtggaaag ataatacata aaataattga tctgggatat gccaaagatg ttgatcaagg 541 aagtctgtgt acatcttttg tgggaacact gcagtatctg gccccagagc tctttgagaa 601 taagccttac acagccactg ttgattattg gagctttggg accatggtat ttgaatgtat 661 tgctggatat aggctttttt tgcatcatct gcagccattt acctggcatg agaagattaa 721 gaagaaggat ccaaagtgta tatttgcatg tgaagagatg tcaggagaag ttcggtttag 781 tagccattta cctcaaccaa atagcctttg tagtttaata gtagaaccca tggaaaactg 841 gctacagttg atgttgaatt gggaccctca gcagagagga ggacctgttg accttacttt 901 gaagcagcca agatgttttg tattaatgga tcacattttg aatttgaaga tagtacacat 961 cctaaatatg acttctgcaa agataatttc ttttctgtta ccacctgatg aaagtcttca 1021 ttcactacag tctcgtattg agcgtgaaac tggaataaat actggttctc aagaacttct 1081 ttcagagaca ggaatttctc tggatcctcg gaaaccagcc tctcaatgtg ttctagatgg 1141 agttagaggc tgtgatagct atatggttta tttgtttgat aaaagtaaaa ctgtatatga 1201 agggccattt gcttccagaa gtttatctga ttgtgtaaat tatattgtac aggacagcaa 1261 aatacagctt ccaattatac agctgcgtaa agtgtgggct gaagcagtgc actatgtgtc 1321 tggactaaaa gaagactata gcaggctctt tcagggacaa agggcagcaa tgttaagtct 1381 tcttagatat aatgctaact taacaaaaat gaagaacact ttgatctcag catcacaaca 1441 actgaaagct aaattggagt tttttcacaa aagcattcag cttgacttgg agagatacag 1501 cgagcagatg acgtatggga tatcttcaga aaaaatgcta aaagcatgga aagaaatgga 1561 agaaaaggcc atccactatg ctgaggttgg tgtcattgga tacctggagg atcagattat 1621 gtctttgcat gctgaaatca tggagctaca gaagagcccc tatggaagac gtcagggaga 1681 cttgatggaa tctctggaac agcgtgccat tgatctatat aagcagttaa aacacagacc 1741 ttcagatcac tcctacagtg acagcacaga gatggtgaaa atcattgtgc acactgtgca 1801 gagtcaggac cgtgtgctca aggagctgtt tggtcatttg agcaagttgt tgggctgtaa 1861 gcagaagatt attgatctac tccctaaggt ggaagtggcc ctcagtaata tcaaagaagc 1921 tgacaatact gtcatgttca tgcagggaaa aaggcagaaa gaaatatggc atctccttaa 1981 aattgcctgt acacagagtt ctgcccggtc ccttgtagga tccagtctag aaggtgcagt 2041 aacccctcag acatcagcat ggctgccccc gacttcagca gaacatgatc attctctgtc 2101 atgtgtggta actcctcaag atggggagac ttcagcacaa atgatagaag aaaatttgaa 2161 ctgccttggc catttaagca ctattattca tgaggcaaat gaggaacagg gcaatagtat 2221 gatgaatctt gattggagtt ggttaacaga atgagttgtc acttgttcac tgtccccaaa 2281 cctatggaag ttgttgctat acatgttgga aatgtgtttt tcccccatga aaccattctt 2341 cagacatcag tcaatggaag aaatggctat gaacagaaac tacatttcta ctatgatcag 2401 aagaacatga ttttacaagt ataacagttt tgagtaattc aagcctctaa acagacagga 2461 atttagaaaa agtcaatgta cttgtttgaa tatttgtttt aataccacag ctatttagaa 2521 gcatcatcac gacacatttg ccttcagtct tggtaaaaca ttacttattt aactgattaa 2581 aaataccttc tatgtattag tgtcaacttt taacttttgg gcgtaagacc aaatgtagtt 2641 ttgtatacag agaagaaaac ctcaagtaat aggcatttta agtaaaagtc tacctgtgtt 2701 tttttctaaa aaggctgctc acaagttcta tttcttgaag aataaattct acctccttgt 2761 gttgcactga acaggttctc ttcctggcat cataaggagt tggtgtaatc attttaaatt 2821 ccactgaaaa tttaacagta tccccttctc atcgaaggga ttgtgtatct gtgcttctaa 2881 tattagttgg ctttcataaa tcatgttgtt gtgtgtatat gtatttaaga tgtacattta 2941 ataatatcaa agagaagatg cctgttaatt tataatgtat ttgaaaatta catgtttttt 3001 catttgtaaa aatgagtcat ttgtttaaac aatctttcat gtcttgtcat acaaatttat 3061 aaaggtctgc actcctttat ctgtaattgt aattccaaaa tccaaaaagc tctgaaaaca 3121 aggtttccat aagcttggtg acaaaattca tttgcttgca atctaatctg aactgacctt 3181 gaatcttttt atcccattta gtgtgaatat tcctttattt tgctgcttga tgatgagagg 3241 gagggctgct gccacagact gtggtgaggg ctggttaatg tagtatggta tatgcacaaa 3301 actacttttc taaaatctaa aatttcataa ttctgaaaca acttgcccca agggtttcag 3361 agaaaggact gtggacctct atcatctgct aagtaattta gaagatatta tttgtcttaa 3421 aaaatgtgaa atgcttttat attctaatag tttttcactt tgtgtattaa atggttttta 3481 aattacaaaa aaaaaaaaaa aaaaaaaa //