LOCUS BC092500 1782 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens transmembrane and coiled-coil domains 7, mRNA (cDNA
clone IMAGE:5259359), with apparent retained intron.
ACCESSION BC092500
VERSION BC092500.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1782
/db_xref="H-InvDB:HIT000334475"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5259359"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 460 a 406 c 465 g 451 t
ORIGIN
1 gttacactcc agtcatggcg gcccgacagg ccgtgggcag cggggctcag gagacatgcg
61 gtctggatcg gattttggag gcattgaagc tgctgctgag cccgggaggc tcgggctcaa
121 gttcactaca ggtcacaaaa catgatgtct tgttggctac tttaaaatct aacctgtctg
181 ctttggagga caagtttctg aaggatcctc agtggaagaa tctgaaactc ctaagagatg
241 aaattgctga taaggcagaa tggccacaaa actccgtgga tgtcacttgg agttttacct
301 ctcaaacctt gttgttgctt ttgtgcttga aggaaaccat gatccgcctt gcagctaatt
361 tcaatccagg taaacccaac cctaggactc cggaagttgc tcctgccctg agccccgatg
421 cacttagtat ctcacaacag aagactgtcc agttcgtttt gcagtttgta gttaccttgg
481 gtatctgccc ctatctcatg cctggtgttg gagtcccttt gagatataga actgaatttg
541 gtgccgtcgt tcaagacgtg gtgtgttttg atgctgcccc cgatgcaact cgaagactgt
601 acaccagctg caaggccctt ctgaatgttg ctcagcacac atctctgggg agcttgatct
661 tctgccacca ctttggggat atcgcagcag gtctgtgcca actgggattc tgcccaacca
721 aaagaaaact gctaacacct gcagaagagg ttctaactga agaggagaga accctatcca
781 ggggggcctt gagagacatg ctggatcaag tctatcagcc cttagcagtc cgggaactgc
841 ttatcctcca gggaggacca ccccagtcct gcacagatgt gaagacacag atgaggtgtc
901 gggccccagc ttggcttcgg cgtctatgtg gacagctgct ctctgaaagg ttaatgagac
961 ctaatggtgt tcaggcagta gtccggggca ttttggaagg agcaggtggt aagaaataaa
1021 atgttgctgt gactttggta tctgttttcc tttgagtcag agtctgaggt gaattattgg
1081 tctttagtat ttacctttaa aacctgactg aaactaaact ccatccttgc agggattgaa
1141 caggttaaac ttagaggccg ttaatgagtt tcttttccaa agaaactaat tctcttgctc
1201 ttttcctaaa acacttgtga tacactgcct attttattga acaatattgt aagccatttc
1261 aaataattta tactatctgg ggaaaacatt acacagaaag ttgaagtaaa aaccctaaag
1321 taaatgttaa ataaagctag gtgtgggccg ggcgcggtgg ctcacgcctg taatcccagc
1381 actttgggag gccaaggcag gtggatcact taaagtcagg agttcaggac cagcctggcc
1441 ggcatggtga gtccccgtct ctactagggt acaaggattg gcctggcgtg gcggcgggcg
1501 cctagccccg gctgcttggg aggctgaggc aggagaatca cttgaacttt ggaggtggag
1561 gttgcagtga gccaggatca tgccactgca ccccagcctg ggtgacagaa tgagactttg
1621 tctcaataat cataataata ataataaagc caggtgcggt ggctcacacc tgtaatccca
1681 gcactttggg aggctgaggc agaaggactg tctgaggcca ggagttcaag accagcctgg
1741 gccacatggc aagactctgt ttctacaaaa aaaaaaaaaa aa
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