LOCUS BC092474 1742 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens proline rich 16, mRNA (cDNA clone MGC:104614
IMAGE:30528467), complete cds.
ACCESSION BC092474
VERSION BC092474.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1742)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1742)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706193.
FEATURES Location/Qualifiers
source 1..1742
/db_xref="H-InvDB:HIT000334450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104614 IMAGE:30528467"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1742
/gene="PRR16"
/gene_synonym="DSC54"
/db_xref="GeneID:51334"
/db_xref="HGNC:HGNC:29654"
CDS 211..1125
/gene="PRR16"
/gene_synonym="DSC54"
/codon_start=1
/product="PRR16 protein"
/protein_id="AAH92474.1"
/db_xref="GeneID:51334"
/db_xref="HGNC:HGNC:29654"
/translation="MSAKSKGNPSSSCPAEGPPAASKTKVKEQIKIIVEDLELVLGDL
KDVAKELKEVVDQIDTLTSDLQLEDEMTDSSKTDTLNSSSSGTTASSLEKIKVQANAP
LIKPPAHPSAILTVLRKPNPPPPPPRLTPVKCEDPKRVVPTANPVKTNGTLLRNGGLP
GGPNKIPNGDICCIPNSNLDKAPVQLLMHRPEKDRCPQAGPRERVRFNEKVQYHGYCP
DCDTRYNIKNREVHLHSEPVHPPGKIPHQGPPLPPTPHLPPFPLENGGMGISHSNSFP
PIRPATVPPPTAPKPQKTILRKSTTTTV"
BASE COUNT 529 a 435 c 362 g 416 t
ORIGIN
1 ggagccgagc gccgcgtctc gggagttgat ggcagcacca ctgtgcggcc gcccggccga
61 gcgcggagcg cagccactcg ccgctgccca gggagcgccc aagatgtggg gggaccgggg
121 cggcagcggc cgtagcagcg ccagggacgg gggcacgcag cagcctccgc tcgcccgcct
181 gtcctgacct gcctcgcttg cccccaaaga atgtcagcca agtccaaggg gaacccctcc
241 tcgtcctgtc cagccgaggg accgccggca gcctccaaaa ccaaggtgaa ggaacagatc
301 aagatcatcg tggaggattt ggaattagtc ctgggcgacc tgaaggacgt ggccaaggaa
361 cttaaggagg tggttgacca gattgacacc ctgacctctg acctacagct ggaggatgag
421 atgactgaca gctccaaaac ggacacgctg aatagtagct caagtggcac aacagcctcc
481 agcctagaga agatcaaagt gcaggctaat gcaccgctta ttaaaccccc agcacaccca
541 tctgctatcc tcacggtcct gagaaagcca aaccctccac cacctcctcc aaggttgaca
601 cctgtgaagt gtgaagaccc caaaagggtg gttccaactg ccaatcctgt aaaaaccaat
661 ggcacccttc tacgaaatgg aggcttacca ggtggaccta acaaaattcc aaatggagat
721 atctgctgca tacccaacag taacttggac aaggctccag tccagcttct gatgcataga
781 cctgaaaaag acagatgtcc ccaggcaggg cctcgagaac gagttcggtt taatgaaaaa
841 gtacagtacc atggctattg tcctgactgt gatacccggt ataacataaa gaacagggag
901 gtccacttac acagtgaacc tgtccaccca ccgggaaaga ttcctcacca aggccctccc
961 ctccctccta caccccatct ccctcctttc ccactagaaa atgggggaat gggaataagc
1021 cacagtaaca gcttcccccc tatcagacct gcaactgtgc ctcctcccac tgcaccaaaa
1081 ccacagaaga cgatcttgag gaagtcaacc actacaaccg tgtgatgtat gccattaaaa
1141 aaattgtttt tttaattttc tatattataa acataaaata agtaatgagc actttctact
1201 caagcaataa aaagcccaaa tatattaatc ctgcattcag caaagtggca taaaaatcac
1261 ctggtaagta tgcagcacat tgcttatatc ctgggtatgc attattttaa atgttgtatc
1321 attaaaaacc tcagaatgat gaaaaatatg aatgatgcat tgtttttgca attgacctat
1381 gacaaactgt gaacctgcag atttcaccta ttttgattta ctataagagc tgggatttga
1441 ttcattttat ttatgcctaa gtcatctatg cattaacatg tcatattctt aactttgatc
1501 taatgctttt tactaggaaa ttttaatact gaaggactat tttattattt ttttctaaag
1561 atgtttgtca ctagtttttc attattaaat gctgaggcca ataccaagaa gtttattttc
1621 tatattatac aattatgaat tacatgctca gctatatatg taataaaata ctttggtctg
1681 tggaaatatt gttaaatcaa taaacaatag taaataatga caaaaccaaa aaaaaaaaaa
1741 aa
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