LOCUS BC092468 1047 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens calcitonin-related polypeptide beta, mRNA (cDNA clone
MGC:104570 IMAGE:5313089), complete cds.
ACCESSION BC092468
VERSION BC092468.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1047)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1047)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 198 Row: f Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45439360.
FEATURES Location/Qualifiers
source 1..1047
/db_xref="H-InvDB:HIT000334444"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104570 IMAGE:5313089"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1047
/gene="CALCB"
/gene_synonym="CGRP-II"
/gene_synonym="CGRP2"
/db_xref="GeneID:797"
/db_xref="HGNC:HGNC:1438"
/db_xref="MIM:114160"
CDS 78..461
/gene="CALCB"
/gene_synonym="CGRP-II"
/gene_synonym="CGRP2"
/codon_start=1
/product="calcitonin-related polypeptide beta"
/protein_id="AAH92468.1"
/db_xref="GeneID:797"
/db_xref="HGNC:HGNC:1438"
/db_xref="MIM:114160"
/translation="MGFRKFSPFLALSILVLYQAGSLQAAPFRSALESSPDPATLSKE
DARLLLAALVQDYVQMKASELKQEQETQGSSSAAQKRACNTATCVTHRLAGLLSRSGG
MVKSNFVPTNVGSKAFGRRRRDLQA"
BASE COUNT 275 a 235 c 262 g 275 t
ORIGIN
1 gactgcaggt gtggtgttca tcccgggtcg accggccgct cgcgctgccc tgaaactcta
61 gtcgccagag aggcggcatg ggtttccgga agttctcccc cttcctggct ctcagtatct
121 tggtcctgta ccaggcgggc agcctccagg cggcgccatt caggtctgcc ctggagagca
181 gcccagaccc ggccacactc agtaaagagg acgcgcgcct cctgctggct gcactggtgc
241 aggactatgt gcagatgaag gccagtgagc tgaagcagga gcaggagaca cagggctcca
301 gctccgctgc ccagaagaga gcctgcaaca ctgccacctg tgtgactcat cggctggcag
361 gcttgctgag cagatcaggg ggcatggtga agagcaactt cgtgcccacc aatgtgggtt
421 ccaaagcctt tggcaggcgc cgcagggacc ttcaagcctg agcagatgaa tgactccagg
481 aagaaggtta tcatgaaact gaactcacca tttctattaa tttctgttgg taagaacttg
541 gtgagaatgc cccgtggaag atacacatgt ttgcatccta agatactgaa aaaagggcac
601 ctttgtcact tgaaaggaat gaaactgaat gcaaaataag ctaattccat atttgctgtg
661 catcattttt atatttaatt ctatgtccag taaaagtgat ggcatctctc attgacttat
721 ctggtagcaa actggttctt tcggagccat cctgttgatc atgcagctcc accaaacctt
781 agggggacgt gaaatcactg cctgttgtgg tctccgagga cacatggtaa tggtgatgct
841 gtgccttgtt atctaagaac atgattgtat aatttgttta agaaaatgtc aatattgtgc
901 catttgtgaa cttcatcaag attaaaagca tattttgggt acatttgttt caaaaccttg
961 gtgatgcatt acaacttgtt ttcttatgta ataataatga tgatgatgat gataataata
1021 aatatttttg agtgctaaaa aaaaaaa
//