LOCUS BC092444 1782 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens amylase, alpha 1A (salivary), mRNA (cDNA clone
MGC:104409 IMAGE:30349929), complete cds.
ACCESSION BC092444
VERSION BC092444.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1782)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1782)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: a Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359830.
FEATURES Location/Qualifiers
source 1..1782
/db_xref="H-InvDB:HIT000334421_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:104409 IMAGE:30349929"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1782
/gene="AMY1A"
/gene_synonym="AMY1B"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
CDS 192..1727
/gene="AMY1A"
/gene_synonym="AMY1B"
/codon_start=1
/product="amylase, alpha 1A (salivary)"
/protein_id="AAH92444.1"
/db_xref="GeneID:276"
/db_xref="HGNC:HGNC:474"
/db_xref="MIM:104700"
/translation="MKLFWLLFTIGFCWAQYSSNTQQGRTSIVHLFEWRWVDIALECE
RYLAPKGFGGVQVSPPNENVAIHNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCN
NVGVRIYVDAVINHMCGNAVSAGTSSTCGSYFNPGSRDFPAVPYSGWDFNDGKCKTGS
GDIENYNDATQVRDCRLSGLLDLALGKDYVRSKIAEYMNHLIDIGVAGFRIDASKHMW
PGDIKAILDKLHNLNSNWFPEGSKPFIYQEVIDLGGEPIKSSDYFGNGRVTEFKYGAK
LGTVIRKWNGEKMSYLKNWGEGWGFMPSDRALVFVDNHDNQRGHGAGGASILTFWDAR
LYKMAVGFMLAHPYGFTRVMSSYRWPRYFENGKDVNDWVGPPNDNGVTKEVTINPDTT
CGNDWVCEHRWRQIRNMVNFRNVVDGQPFTNWYDNGSNQVAFGRGNRGFIVFNNDDWT
FSLTLQTGLPAGTYCDVISGDKINGNCTGIKIYVSDDGKAHFSISNSAEDPFIAIHAE
SKL"
BASE COUNT 534 a 309 c 422 g 517 t
ORIGIN
1 aaaccagttg tttccgtctt gtcggtctgt cagggttgga aagtccaagc cataggaccc
61 agtttccttt cttagcttac gttatctacc agagcaccgt gggctgttac ttgccttgag
121 ttggaagcgg ttcgcattta taccggaata taaatagttt ctggaaagga cactgacaac
181 ttcaaagcaa aatgaagctc ttttggttgc ttttcaccat tgggttctgc tgggctcagt
241 attcctcaaa tacacaacaa ggacgaacat ctattgttca tctgtttgaa tggcgatggg
301 ttgatattgc tcttgaatgt gagcgatatt tagctcccaa gggatttgga ggggttcagg
361 tctctccacc aaatgaaaat gttgccattc acaacccttt cagaccttgg tgggaaagat
421 accaaccagt tagctataaa ttatgcacaa gatctggaaa tgaagatgaa tttagaaaca
481 tggtgactag atgcaacaat gttggggttc gtatttatgt ggatgctgta attaatcata
541 tgtgtggtaa tgctgtgagt gcaggaacaa gcagtacctg tggaagttac ttcaaccctg
601 gaagtaggga ctttccagca gtcccatatt ctggatggga ttttaatgat ggtaaatgta
661 aaactggaag tggagatatc gagaactata atgatgctac tcaggtcaga gattgtcgtc
721 tgtctggtct tctcgatctt gcactgggga aggattatgt gcgttctaag attgccgaat
781 atatgaacca tctcattgac attggtgttg cagggttcag aattgatgct tccaagcaca
841 tgtggcctgg agacataaag gcaattttgg acaaactgca taatctaaac agtaactggt
901 tcccggaagg tagtaaacct ttcatttacc aggaggtaat tgatctgggt ggtgagccaa
961 ttaaaagcag tgactacttt ggtaatggcc gggtgacaga attcaagtat ggtgcaaaac
1021 tcggcacagt tattcgcaag tggaatggag agaagatgtc ttacttaaag aactggggag
1081 aaggttgggg tttcatgcct tctgacagag cgcttgtctt tgtggataac catgacaatc
1141 aacgagggca tggcgctgga ggagcctcta tacttacctt ctgggatgct aggctgtaca
1201 aaatggcagt tggatttatg cttgctcatc cttatggatt tacacgagta atgtcaagct
1261 accgttggcc aagatatttt gaaaatggaa aagatgttaa tgattgggtt gggccaccaa
1321 atgataatgg agtaactaaa gaagttacta ttaatccaga cactacttgt ggcaatgact
1381 gggtctgtga acatcgatgg cgccaaataa ggaacatggt taatttccgc aatgtagtgg
1441 atggccagcc ttttacaaac tggtatgata atgggagcaa ccaagtggct tttgggagag
1501 gaaacagagg attcattgtt ttcaacaatg atgactggac attttcttta actttgcaaa
1561 ctggtcttcc tgctggcaca tactgtgatg tcatttctgg agataaaatt aatggcaact
1621 gcacaggcat taaaatctac gtttctgatg atggcaaagc tcatttttct attagtaact
1681 ctgctgaaga tccatttatt gcaattcatg ctgaatctaa attgtaaaat ttaaaattaa
1741 atgcaaatcc acaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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