LOCUS BC092432 1126 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens zinc finger, MYND-type containing 8, mRNA (cDNA clone
IMAGE:30717334), complete cds.
ACCESSION BC092432
VERSION BC092432.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1126)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1126)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Professor Miklos Palkovits
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: d Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34335263
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1126
/db_xref="H-InvDB:HIT000334409"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30717334"
/tissue_type="Spinal cord"
/clone_lib="NIH_MGC_227"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1126
/gene="ZMYND8"
/gene_synonym="PRO2893"
/gene_synonym="RACK7"
/db_xref="GeneID:23613"
/db_xref="HGNC:HGNC:9397"
CDS 60..524
/gene="ZMYND8"
/gene_synonym="PRO2893"
/gene_synonym="RACK7"
/codon_start=1
/product="ZMYND8 protein"
/protein_id="AAH92432.1"
/db_xref="GeneID:23613"
/db_xref="HGNC:HGNC:9397"
/translation="MHPQSLAEEEIKTEQEVVEGMDISTRSKDPGSAERTAQKRKFPS
PPHSSNGHSPQDTSTSPIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVP
QDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEVSS"
BASE COUNT 329 a 251 c 234 g 312 t
ORIGIN
1 ggagaactag gagcctgtcc tccatgtttt ataagtattg acattacaca gtgttaacaa
61 tgcatccaca gagcttggct gaagaggaaa taaaaacaga acaggaggtg gtagagggca
121 tggatatctc tactcgctcc aaagatcctg gctctgcaga gagaacagcc cagaaaagaa
181 agttccccag ccctccacat tcttccaatg gccactcgcc gcaggacaca tcaacaagcc
241 ccattaaaaa gaaaaagaaa cctggcttac tgaacagtaa caataaggag cagtcagaac
301 taagacatgg tccgttttac tatatgaagc agccactcac cacagaccct gttgatgttg
361 taccgcagga tggacggaat gatttctact gctgggtttg tcaccgggaa ggccaagtcc
421 tttgctgtga gctctgtccc cgggtttatc acgctaagtg tctgagactg acatcggaac
481 cagaggggga ctggttttgt cctgaatgtg aggttagttc ctgatgaatg aatgcattac
541 ctgcctcgtt tcctctcctt tctctttctt ccttttattt ttaaatttac aaataatcca
601 gatagatgga aaagagaaat ttcttgcttt ccacctgttc tatcctggtc acccccttct
661 tgaccaacac cggcagtggc tgcagtactg cagctcttgg aaagacaatt gcacggaata
721 ttatttctga tttctcatga gtccttggat tccttggaga tctgtagtcg tcatctctgc
781 atcttctatg atgaactttt tgaaagttaa ctcccaaatc atgaacggct cacacatttt
841 gaaaagatct cattctgttt tctccgtctt ggatgttgtt gcctgccgca tcattgaatc
901 atcagcagta gccaagctga gaagaccacg tttggttgca tgttccctgt agtggccgtc
961 tggtgctttc ttttgtgcaa caagtatttc ttgagtgcct attaggtgct gggaattcga
1021 cagtgcacaa aaacaggcat ggatcatttt tttttttcca gcagaaaagg acaaaaacca
1081 aaataaataa agttccaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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