LOCUS BC092418 3797 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens myosin binding protein C, slow type, mRNA (cDNA clone
MGC:102955 IMAGE:30529254), complete cds.
ACCESSION BC092418
VERSION BC092418.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3797)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3797)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46049118.
FEATURES Location/Qualifiers
source 1..3797
/db_xref="H-InvDB:HIT000334396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:102955 IMAGE:30529254"
/tissue_type="Muscle pool- 2 tissues- cardiac and skeletal
muscle."
/clone_lib="NIH_MGC_183"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..3797
/gene="MYBPC1"
/gene_synonym="MYBPCC"
/gene_synonym="MYBPCS"
/gene_synonym="slow-type"
/db_xref="GeneID:4604"
/db_xref="HGNC:HGNC:7549"
/db_xref="MIM:160794"
CDS 88..3459
/gene="MYBPC1"
/gene_synonym="MYBPCC"
/gene_synonym="MYBPCS"
/gene_synonym="slow-type"
/codon_start=1
/product="myosin binding protein C, slow type"
/protein_id="AAH92418.1"
/db_xref="GeneID:4604"
/db_xref="HGNC:HGNC:7549"
/db_xref="MIM:160794"
/translation="MPEPTKKEENEVPAPAPPPEEPSKEKEAGTTPAKDWTLVETPPG
EEQAKQNANSQLSILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDL
ASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVH
ESTGTTPNIDIRSAFKRSGEGQEDAGELDFSGLLKRREVKQQEEEPQVDVWELLKNAK
PSEYEKIAFQYGITDLRGMLKRLKRMRREEKKSAAFAKILDPAYQVDKGGRVRFVVEL
ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGDEKCSTE
LFVREPPIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIR
VEGKKHILIIEGATKADAAEYSVMTTGGQSSAKLSVDLKPLKILTPLTDQTVNLGKEI
CLKCEISENIPGKWTKNGLPVQESDRLKVVHKGRIHKLVIANALTEDEGDYVFAPDAY
NVTLPAKVHVIDPPKIILDGLDADNTVTVIAGNKLRLEIPISGEPPPKAMWSRGDKAI
MEGSGRIRTESYPDSSTLVIDIAERDDSGVYHINLKNEAGEAHASIKVKVVDFPDPPV
APTVTEVGDDWCIMNWEPPAYDGGSPILGYFIERKKKQSSRWMRLNFDLCKETTFEPK
KMIEGVAYEVRIFAVNAIGISKPSMPSRPFVPLAVTSPPTLLTVDSVTDTTVTMRWRP
PDHIGAAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNAA
GASEPKYYSQPILVKEIIEPPKIRIPRHLKQTYIRRVGEAVNLVIPFQGKPRPELTWK
KDGAEIDKNQINIRNSETDTIIFIRKAERSHSGKYDLQVKVDKFVETASIDIQIIDRP
GPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIEHYHRTSA
TITELVIGNEYYFRVFSENMCGLSEDATMTKESAVIARDGKIYKNPVYEDFDFSEAPM
FTQPLVNTYAIAGYNATLNCSVRGNPKPKITWMKNKVAIVDDPRYRMFSNQGVCTLEI
RKPSPYDGGTYCCKAVNDLGTVEIECKLEVKVIAQ"
BASE COUNT 1198 a 790 c 921 g 888 t
ORIGIN
1 gcaccatctc tcgcctgcct gtggggtttc tgtcaactag tcgtggaggg aaggagactc
61 tttaaagaat aacatcttat tgtggccatg ccagaaccca ctaagaaaga ggaaaatgaa
121 gtgccagccc cagccccacc cccggaagaa ccaagtaaag agaaggaggc cggaactaca
181 ccagcaaaag actggaccct tgtcgaaact cctcctgggg aggaacaagc caagcagaat
241 gccaactccc agctgtccat cttgttcatt gaaaaacctc aaggaggaac agtgaaagtt
301 ggtgaagata tcaccttcat agccaaagtc aaggctgaag atcttctgag aaaacccact
361 atcaaatggt tcaaaggaaa atggatggac ctggccagca aagccgggaa gcaccttcag
421 ctgaaggaaa cctttgagag gcacagtcgg gtgtacacat ttgagatgca gatcatcaag
481 gccaaagata actttgcagg aaattacaga tgcgaggtca cctataagga taagtttgac
541 agctgttcat ttgatcttga agtgcacgaa tctactggga ctactccaaa cattgacatc
601 agatctgctt tcaagagaag tggagaaggt caagaggatg caggagaact tgactttagt
661 ggtctcctga aacgtaggga ggtgaagcag caggaggaag aaccccaggt ggacgtatgg
721 gagttgctga agaacgcgaa acccagtgag tacgagaaga tcgccttcca gtatggaatc
781 accgacctgc gcggcatgct caagcgactc aagcgcatgc gcagagagga gaagaagagc
841 gcagcttttg caaaaattct tgatcctgca tatcaggttg acaaaggagg cagagtgagg
901 tttgttgtgg agctggcaga tccaaagttg gaggtgaaat ggtataaaaa tggtcaagaa
961 attcgaccca gtaccaaata catctttgaa cacaaaggat gccagagaat cctgtttatc
1021 aataactgtc agatgacaga tgattcagag tattatgtga cagccggtga tgagaaatgt
1081 tccactgagc tcttcgtaag agagcctcca attatggtga ccaaacagct ggaagataca
1141 actgcttatt gtggggagag agtggaatta gaatgtgagg tgtctgaaga tgatgccaat
1201 gtaaaatggt ttaagaatgg tgaagagatt atccctggtc caaaatcaag ataccgaatt
1261 agagttgagg gtaaaaaaca catcttgatc atagagggag caacaaaggc tgatgctgca
1321 gaatattcag taatgacaac aggaggacaa tcatctgcta aacttagtgt tgacttgaaa
1381 cctctgaaga ttttgactcc tctgactgat cagactgtaa atcttggaaa agaaatctgc
1441 ctgaagtgtg aaatctctga aaacatacca ggaaaatgga ctaaaaatgg cctacctgtt
1501 caggagagtg accgtctaaa ggtggttcac aagggaagga tccacaagtt agtgatagcc
1561 aatgccctca ctgaagatga aggtgattat gtatttgcac ctgatgccta caatgttact
1621 ctgcctgcca aagttcatgt tattgatcct cctaagatca tcctggatgg tcttgatgct
1681 gacaacacag tgacagtgat tgcaggaaac aagcttcgtc ttgagatccc catcagcgga
1741 gaaccacctc ctaaagccat gtggagccgg ggagataagg ctattatgga aggcagtggc
1801 cggataagaa cagaatctta ccctgatagc agcactctgg tcattgatat agctgaaaga
1861 gatgactctg gtgtttacca catcaatctg aaaaacgaag ctggagaggc acatgcaagc
1921 atcaaggtta aagttgtgga cttccctgat cctccagtgg caccgactgt gacagaggtg
1981 ggagatgact ggtgtatcat gaactgggag cctcctgcct acgacggagg ctctccaatc
2041 ctaggatatt ttattgagag gaagaagaaa caaagctcca ggtggatgag gctgaatttt
2101 gatctctgca aagaaacaac ttttgagccc aagaagatga ttgaaggtgt ggcctatgag
2161 gtccgcatct ttgcagtcaa tgccattggc atctccaagc ccagtatgcc ctccaggcct
2221 tttgttcctt tggctgtaac aagccctcct actcttctga ctgtggactc tgtcactgac
2281 acgactgtca cgatgaggtg gcgcccccca gaccacattg gtgcagcagg tttagatggc
2341 tatgtgctag agtattgctt tgaaggaact gaggactgga tagttgcaaa caaagatctg
2401 attgacaaga cgaagttcac catcacaggt ctgccaacag atgcaaagat ctttgtgcgt
2461 gtgaaggctg ttaatgcagc tggtgccagc gagcccaagt actattctca gcccattctc
2521 gtgaaggaaa tcatagaacc tccaaagatt cgcattccaa gacacctgaa gcaaacctat
2581 atccgcagag ttggagaagc tgtcaatctg gttatacctt tccagggaaa accaagacca
2641 gaattaactt ggaagaagga tggtgcagaa attgataaga atcaaataaa cattcgcaac
2701 tctgagactg atacaatcat atttattaga aaagcagaga ggagccactc tgggaaatat
2761 gatctgcaag tcaaagtgga caaattcgtg gagaccgcat caattgacat ccagatcatt
2821 gaccgtccag gtccacccca aattgtgaag attgaggatg tctggggaga aaatgtcgct
2881 ctcacatgga ctccaccaaa ggatgatgga aatgctgcta tcacaggcta taccattcag
2941 aaggctgaca agaagagcat ggaatggttt actgtcattg agcattatca tcgaaccagt
3001 gccaccatta ctgaattggt catagggaat gaatattact tccgggtctt ttctgaaaac
3061 atgtgtggcc tcagtgagga tgccaccatg actaaagaga gtgcagtgat cgccagggat
3121 ggtaaaatct acaaaaatcc agtgtatgaa gactttgatt tctcagaggc acccatgttt
3181 actcagcctt tggttaacac ctatgccata gctggttaca atgccaccct aaactgcagt
3241 gtgagaggaa atcctaagcc taaaataacc tggatgaaaa acaaagttgc tattgtggat
3301 gatccaagat acaggatgtt cagcaaccag ggagtctgta ccctggaaat tcgcaagccc
3361 agcccctatg atggaggcac ttactgctgc aaagcagtca atgaccttgg gacagtggag
3421 attgaatgca aactggaggt gaaagtcatt gcacaataag gatttttgaa tgtataatat
3481 catctaaggt gggctctcct tctgcagact cctcttgcaa ggcgtacctc caaacataat
3541 tgattcatat ctgcgagact tacactcaag caatcctgag gaatactgag ggagggcctg
3601 gctactgtct ctctgcactc tgctgctttg aaatctggtt gaaatgagaa aaagcatttt
3661 ctgttttccc accaggcccc caagtgtggt ctttttcttt cctcctaatg ttgaagagaa
3721 aaaaaaaaaa aaaaagtttg cccagattgc ttaattaaaa attgcaaaca aaatctcaaa
3781 aaaaaaaaaa aaaaaaa
//