LOCUS BC091526 1587 bp mRNA linear HUM 12-APR-2007
DEFINITION Homo sapiens sine oculis binding protein homolog (Drosophila), mRNA
(cDNA clone IMAGE:30512219), complete cds.
ACCESSION BC091526
VERSION BC091526.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1587)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Agencourt
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 221 Row: a Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62243926
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1587
/db_xref="H-InvDB:HIT000334376"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30512219"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_192"
/lab_host="DH10B"
/note="Vector: pExpress1"
gene 1..1587
/gene="SOBP"
/db_xref="GeneID:55084"
/db_xref="HGNC:HGNC:29256"
CDS 14..463
/gene="SOBP"
/codon_start=1
/product="SOBP protein"
/protein_id="AAH91526.2"
/db_xref="GeneID:55084"
/db_xref="HGNC:HGNC:29256"
/translation="MAEMEKEGRPPENKRSRKPAHPVKREINEEMKNFAENTMNELLG
WYGYDKVELKDGEDIEFRSYPTDGESRQHISVLKENSLPKPKLPEDSVISPYNISTGY
SGLATGNGLSDSPAGSKDHGSVPIIVPLIPPPFIKPPADEKTEAQKS"
BASE COUNT 556 a 247 c 324 g 460 t
ORIGIN
1 cagacacaaa aacatggcag aaatggagaa agaagggaga cctcccgaaa ataaacggag
61 caggaagccg gctcacccag tgaaaaggga gatcaatgag gagatgaaga actttgcaga
121 aaacaccatg aatgaactcc ttggctggta tggctatgat aaggttgaat taaaagatgg
181 tgaggatatt gaattcagga gctaccctac agatggggag agccggcagc acatttctgt
241 tctcaaagaa aattctttgc caaaaccaaa attacccgag gacagtgtta tttcaccata
301 caatataagc acaggctatt cagggcttgc cactggaaat ggactcagtg actcacctgc
361 agggtcaaag gatcatggca gtgtgcccat tattgtacct ttaattccac cacctttcat
421 aaagccacca gcagatgaga aaactgaggc ccagaaaagt tgagcaactt gcctgaggtt
481 gcacagatac tgagtggcag agctgatatt tgaacctata cattatgtct ccttagccta
541 tatccttaac cactggatta tccaaaacac tatggcagta tttcagtcag ttaagtattt
601 actgaatgtt ccttacattg tgctagacaa tacagatgta tgtcatcatc cttgactacc
661 aagaacttaa tagtactgtt ggcatatgat caaaacatca ttctagtttt accttggaat
721 gtatgatata attttagttg catatggaag gtgcatggta ggactacaag ggcaattaaa
781 gtggagtagc aaaaagtcta taggcagata atcaagaact gttatattta tacagttgag
841 gggaaatggc acctgaaact taatataggc tagaagatag caattgaaaa ctcaaattca
901 aagtgataaa aaaagatcca aaatgaaacc tgaaaatgtt agatactatg atatgggtcc
961 tgctttattg ttctctttac aattaagggt tcttaaaaat gtgtaaggca cattttagtg
1021 tgttctatca tttttaatgc cagatgaaat gtataatttg aatggtagca tgaggtggtg
1081 aagactgcca gagcaagaac caggagacct gggttgctaa tgccagctct gccatttatt
1141 ggccatgtaa tcttgaataa ggtagtttct ctaagcctta gtttccttgt ctgcaaaatg
1201 atgtggttag cttacatgat ctgttatttc cctatattta taaaatcctt attttgtgac
1261 ttgtatggtt agttgctctc ctgattttat gatttgagag ggtatgtttt aatgtgcttt
1321 aacaggtact tgttaattga acagatataa agcaaactgc atatatgtat agttataaca
1381 gccagaagtc tgatgaaaga tttatactgc ttgggacaag ttttaatgat tgttaatttt
1441 tactttgaac aaatagtgaa tgaaataata gatttgacat tttttaagat aacaagtgct
1501 aggaaatatg aaatgtgagt aaataaaaag gttcatatgt tattagaact aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//