LOCUS BC091516 3019 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 112, mRNA (cDNA clone
MGC:111496 IMAGE:30389801), complete cds.
ACCESSION BC091516
VERSION BC091516.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3019)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3019)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254930.
FEATURES Location/Qualifiers
source 1..3019
/db_xref="H-InvDB:HIT000334366"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111496 IMAGE:30389801"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..3019
/gene="C1orf112"
/gene_synonym="FLJ10706"
/gene_synonym="RP1-97P20.1"
/db_xref="GeneID:55732"
/db_xref="HGNC:HGNC:25565"
CDS 312..2873
/gene="C1orf112"
/gene_synonym="FLJ10706"
/gene_synonym="RP1-97P20.1"
/codon_start=1
/product="chromosome 1 open reading frame 112"
/protein_id="AAH91516.1"
/db_xref="GeneID:55732"
/db_xref="HGNC:HGNC:25565"
/translation="MFLPHMNHLTLEQTFFSQVLPKTVKLFDDMMYELTSQARGLSSQ
NLEIQTTLRNILQTMVQLLGALTGCVQHICATQESIILENIQSLPSSVLHIIKSTFVH
CKNSESVYSGCLHLVSDLLQALFKEAYSLQKQLMELLDMVCMDPLVDDNDDILNMVIV
IHSLLDICSVISSMDHAFHANTWKFIIKQSLKHQSIIKSQLKHKDIITSLCEDILFSF
HSCLQLAEQMTQSDAQDNADYRLFQKTLKLCRFFANSLLHYAKEFLPFLSDSCCTLHQ
LYLQIHSKFPPSLYATRISKAHQEEIAGAFLVTLDPLISQLLTFQPFMQVVLDSKLDL
PCELQFPQCLLLVVVMDKLPSQPKEVQTLWCTDSQVSETTTRISLLKAVFYSFEQCSG
ELSLPVHLQGLKSKGKAEVAVTLYQHVCVHLCTFITSFHPSLFAELDAALLNAVLSAN
MITSLLAMDAWCFLARYGTAELCAHHVTIVAHLIKSCPGECYQLINLSILLKRLFFFM
APPHQLEFIQKFSPKEAENLPLWQHISFQALPPELREQTVHEVTTVGTAECRKWLSRS
RTLGELESLNTVLSALLAVCNSAGEALDTGKQTAIIEVVSQLWAFLNIKQVADQPYVQ
QTFSLLLPLLGFFIQTLDPKLILQAVTLQTSLLKLELPDYVRLAMLDFVSSLGKLFIP
EAIQDRILPNLSCMFALLLADRSWLLEQHTLEAFTQFAEGTNHEEIVPQCLSSEETKN
KVVSFLEKTGFVDETEAAKVERVKQEKGIFWEPFANVTVEEAKRSSLQPYAKRARQEF
PWEEEYRSALHTIAGALEATESLLQKGPAPAWLSMEMEALQERMDKLKRYIHTLG"
BASE COUNT 862 a 621 c 613 g 923 t
ORIGIN
1 tcctgtttga cgaaagtatg tctcaggaag gctggagtct ttctgaaaga gttgcttccg
61 cttgttgttg gctttcaact gttggatttg aggcgcttag cgccttcttc gtcggggtgc
121 agcacattct tgattggtct catgcctttg tggttgtaaa tgtgcctgga atcctagcct
181 ttcatggttt gttctgagta atgaataccc tattactatg acactagtat cttccttaat
241 tatcctactc attgtctcaa cattctgaaa gttggattga gcatattcaa attttgaaaa
301 ttattgtaga aatgttttta cctcatatga accacctgac attggaacag actttctttt
361 cacaagtgtt accaaagact gtgaaattat tcgatgacat gatgtatgaa ttaaccagtc
421 aagccagagg actgtcaagc caaaatttgg aaatccagac cactctaagg aatattttac
481 aaacaatggt gcagctctta ggagctctca caggatgtgt tcagcatatc tgtgccacac
541 aggaatccat cattttggaa aatattcaga gtctcccctc ctcagtcctt catataatta
601 aaagcacatt tgtgcattgt aagaatagtg aatctgtgta ttctgggtgt ttacacctag
661 tttcagacct tctccaggct cttttcaagg aggcctattc tcttcaaaag cagttaatgg
721 aactgctgga catggtttgc atggaccctt tagtagatga caatgatgat attttgaata
781 tggtaatagt tattcattct ttattggata tctgctctgt tatttccagt atggaccatg
841 catttcatgc caatacttgg aagtttataa ttaagcagag ccttaagcac cagtccataa
901 taaaaagcca gttgaaacac aaagatataa ttactagctt gtgtgaagac attcttttct
961 ccttccattc ttgtttacag ttagctgagc agatgacaca gtcagatgca caggataatg
1021 ctgactacag attatttcag aaaacactca aattgtgtcg tttttttgcc aactcccttt
1081 tgcactacgc taaggaattt cttcctttcc tctctgattc ttgctgtact ttgcaccaac
1141 tgtatcttca gatacacagc aagtttcctc caagccttta tgctaccagg atttctaaag
1201 cacaccaaga ggaaatagca ggtgctttcc tagtgacact ggatccactt atcagtcagc
1261 tgctcacatt tcagcctttc atgcaggtgg ttttggacag taaattagac ctgccatgtg
1321 aactgcagtt tccacaatgt cttcttctgg ttgttgtcat ggataagctg ccatctcagc
1381 ctaaggaagt gcaaaccctg tggtgcacag acagccaggt ctcagaaacg acaaccagga
1441 tatctctact caaagccgtt ttctacagtt ttgagcagtg ttctggtgaa ctctctctac
1501 ctgttcattt acagggatta aagagtaagg ggaaagctga ggtggctgtc accttgtatc
1561 agcatgtttg tgttcatctg tgtacattta ttacttcctt tcatccctca ctgtttgctg
1621 aactggatgc tgctctgctg aatgctgtac ttagtgctaa tatgatcacc tctttgttag
1681 ctatggatgc atggtgcttc cttgctcgat atgggactgc tgaactgtgt gcacaccatg
1741 tcaccatagt ggctcatctg ataaagtcat gccctggaga atgttatcaa ctcatcaacc
1801 tatcaatact gttgaagcgt ctctttttct tcatggcacc accccatcag ctggagttta
1861 tccagaaatt ttccccaaaa gaagcagaaa atctgcctct gtggcaacat atttccttcc
1921 aggcgttacc tcctgagctt agggaacaaa ctgtccatga ggtcaccaca gtaggcactg
1981 cagaatgcag gaaatggctg agcaggagtc gtactttggg agaactagaa tctctgaaca
2041 cagtactgtc tgctttgctt gcagtatgta attctgctgg tgaagctttg gatacaggaa
2101 aacaaactgc aattatcgaa gttgtgagtc agctttgggc ttttttaaac attaaacagg
2161 tagcagatca accttatgtt caacagacat tcagcctttt acttccactg ttgggatttt
2221 tcattcaaac tctagatcct aaactgatac ttcaggcagt aactttgcag acctcgctac
2281 ttaaattaga gcttcctgac tatgttcgtt tggcaatgtt ggattttgta tcttctttag
2341 gaaaactttt tatacctgaa gctatccagg acagaattct gcccaacctg tcctgtatgt
2401 ttgccttact gctagctgac aggagttggc tgctagaaca acataccttg gaggcgttta
2461 ctcagttcgc tgagggaaca aatcatgaag agatagttcc acagtgtctc agttctgaag
2521 aaactaagaa caaagttgta tcctttctgg agaagactgg gtttgtagat gaaactgaag
2581 ctgccaaagt ggaacgtgtg aaacaggaaa aaggtatttt ctgggaaccc tttgctaatg
2641 tgactgtaga agaagcaaag aggtcatctt tacagcctta tgcaaaaaga gctcgtcagg
2701 agttcccctg ggaagaagag tacaggtcag cgctgcatac aatagcaggg gctttggaag
2761 caactgagtc actactccaa aagggtcctg ctccagcctg gctttcaatg gaaatggagg
2821 cgctccaaga aaggatggat aagctaaaac gttacataca tactctaggg tgaaacttat
2881 cactaggcag aactgggttt gatgctttgt caactgaaaa tacttatgtc tgtacatttt
2941 ctaacagata taaaacaaat tttgtaaagt tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3001 aaaaaaaaaa aaaaaaaaa
//