LOCUS BC091503 2065 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens melanoma antigen family D, 2, mRNA (cDNA clone
MGC:111101 IMAGE:30529545), complete cds.
ACCESSION BC091503
VERSION BC091503.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2065)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2065)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: k Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29171704.
FEATURES Location/Qualifiers
source 1..2065
/db_xref="H-InvDB:HIT000334353"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111101 IMAGE:30529545"
/tissue_type="Muscle pool- 2 tissues- cardiac and skeletal
muscle."
/clone_lib="NIH_MGC_183"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2065
/gene="MAGED2"
/gene_synonym="11B6"
/gene_synonym="BCG1"
/gene_synonym="HCA10"
/gene_synonym="JCL-1"
/gene_synonym="MAGE-D2"
/gene_synonym="MAGED"
/gene_synonym="MGC8386"
/db_xref="GeneID:10916"
/db_xref="HGNC:HGNC:16353"
/db_xref="MIM:300470"
CDS 66..1886
/gene="MAGED2"
/gene_synonym="11B6"
/gene_synonym="BCG1"
/gene_synonym="HCA10"
/gene_synonym="JCL-1"
/gene_synonym="MAGE-D2"
/gene_synonym="MAGED"
/gene_synonym="MGC8386"
/codon_start=1
/product="melanoma antigen family D, 2"
/protein_id="AAH91503.1"
/db_xref="GeneID:10916"
/db_xref="HGNC:HGNC:16353"
/db_xref="MIM:300470"
/translation="MSDTSESGAGLTRFQAEASEKDSSSMMQTLLTVTQNVEVPETPK
ASKALEVSEDVKVSKASGVSKATEVSKTPEAREAPATQASSTTQLTDTQVLAAENKSL
AADTKKQNADPQAVTMPATETKKVSHVADTKVNTKAQETEAAPSQAPADEPEPESAAA
QSQENQDTRPKVKAKKARKVKHLDGEEDGSSDQSQASGTTGGRRVSKALMASMARRAS
RGPIAFWARRASRTRLAAWARRALLSLRSPKARRGKARRRAAKLQSSQEPEAPPPRDV
ALLQGRANDLVKYLLAKDQTKIPIKRSDMLKDIIKEYTDVYPEIIERAGYSLEKVFGI
QLKEIDKNDHLYILLSTLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIW
EVLRKLGLRPGIHHSLFGDVKKLITDEFVKQKYLDYARVPNSNPPEYEFFWGLRSYYE
TSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAAAEAAAEAKARAEIRARMGIGLG
SENAAGPCNWDEADIGPWAKARIQAGAEAKAKAQESGSASTGASTSTNNSASASASTS
GGFSAGASLTATLTFGLFAGLGGAGASTSGSSGACGFSYK"
BASE COUNT 564 a 523 c 570 g 408 t
ORIGIN
1 gaaggcagac gcatcccgaa ctcgctggag gacaaggctc agctcttgcc aggccaaatt
61 gagacatgtc tgacacaagc gagagtggtg caggtctaac tcgcttccag gctgaagctt
121 cagaaaagga cagtagctcg atgatgcaga ctctgttgac agtgacccag aatgtggagg
181 tcccagagac accgaaggcc tcaaaggcac tggaggtctc agaggatgtg aaggtctcaa
241 aagcctctgg ggtctcaaag gccacagagg tctcaaagac cccagaggct cgggaggcac
301 ctgccaccca ggcctcgtct actactcagc tgactgatac ccaggttctg gcagctgaaa
361 acaagagtct agcagctgac accaagaaac agaatgctga cccgcaggct gtgacaatgc
421 ctgccactga gaccaaaaag gtcagccatg tggctgatac gaaggtcaat acaaaggctc
481 aggagactga ggctgcaccc tctcaggccc cagcagatga acctgagcct gagagtgcag
541 ctgcccagtc tcaggagaat caggatactc ggcccaaggt caaagccaag aaagcccgaa
601 aggtgaagca tctggatggg gaagaggatg gcagcagtga tcagagtcag gcttctggaa
661 ccacaggtgg ccgaagggtc tcaaaggctc taatggcctc aatggcccgc agggcttcaa
721 gaggtcccat agccttttgg gcccgcaggg catcaaggac tcggttggct gcttgggccc
781 ggagagcctt gctctccctg agatcaccta aagcccgtag gggcaaggct cgccgtagag
841 ctgccaagct ccagtcatcc caagagcctg aagcaccacc acctcgggat gtggcccttt
901 tgcaagggag ggcaaatgat ttggtgaagt accttttggc taaagaccag acgaagattc
961 ccatcaagcg ctcggacatg ctgaaggaca tcatcaaaga atacactgat gtgtaccccg
1021 aaatcattga acgagcaggc tattctttgg agaaggtatt tgggattcaa ttgaaggaaa
1081 ttgataagaa tgaccacttg tacattcttc tcagcacctt agagcccact gatgcaggca
1141 tactgggaac gactaaggac tcacccaagc tgggtctgct catggtgctt cttagcatca
1201 tcttcatgaa tggaaatcgg tccagtgagg ctgtcatctg ggaggtgctg cgcaagttgg
1261 ggctgcgccc tgggatacat cattcactct ttggggacgt gaagaagctc atcactgatg
1321 agtttgtgaa gcagaagtac ctggactatg ccagagtccc caatagcaat ccccctgaat
1381 atgagttctt ctggggcctg cgctcttact atgagaccag caagatgaaa gtcctcaagt
1441 ttgcctgcaa ggtacaaaag aaggatccca aggaatgggc agctcagtac cgagaggcga
1501 tggaagcgga tttgaaggct gcagctgagg ctgcagctga agccaaggct agggccgaga
1561 ttagagctcg aatgggtatt gggctcggct cggagaatgc tgccgggccc tgcaactggg
1621 acgaagctga tatcggaccc tgggccaaag cccggatcca ggcgggagca gaagctaaag
1681 ccaaagccca agagagtggc agtgccagca ctggtgccag taccagtacc aataacagtg
1741 ccagtgccag tgccagcacc agtggtggct tcagtgctgg tgccagcctg accgccactc
1801 tcacatttgg gctcttcgct ggccttggtg gagctggtgc cagcaccagt ggcagctctg
1861 gtgcctgtgg tttctcctac aagtgagatt ttagatattg ttaatcctgc cagtctttct
1921 cttcaagcca gggtgcatcc tcagaaacct actcaacaca gcactctagg cagccactat
1981 caatcaattg aagttgacac tctgcattaa atctatttgc catttctgaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaa
//