LOCUS BC091498 2562 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens dynein, cytoplasmic 1, intermediate chain 2, mRNA
(cDNA clone MGC:111094 IMAGE:30386904), complete cds.
ACCESSION BC091498
VERSION BC091498.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2562)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2562)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: h Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307878.
FEATURES Location/Qualifiers
source 1..2562
/db_xref="H-InvDB:HIT000334348"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111094 IMAGE:30386904"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2562
/gene="DYNC1I2"
/gene_synonym="IC2"
/db_xref="GeneID:1781"
/db_xref="HGNC:HGNC:2964"
/db_xref="IMGT/GENE-DB:2964"
/db_xref="MIM:603331"
CDS 157..1995
/gene="DYNC1I2"
/gene_synonym="IC2"
/codon_start=1
/product="DYNC1I2 protein"
/protein_id="AAH91498.1"
/db_xref="GeneID:1781"
/db_xref="HGNC:HGNC:2964"
/db_xref="IMGT/GENE-DB:2964"
/db_xref="MIM:603331"
/translation="MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAV
APVQEESDLEKKRREAEALLQSMGLTPESPIVPPPMSPSSKSVSTPSEAGSQDSGDGA
VGSRRGPIKLGMAKITQVDFPPREIVTYTKETQTPVMAQPKEDEEEDDDVVAPKPPIE
PEEEKTLKKDEENDSKAPPHELTEEEKQQILHSEEFLSFFDHSTRIVERALSEQINIF
FDYSGRDLEDKEGEIQAGAKLSLNRQFFDERWSKHRVVSCLDWSSQYPELLVASYNNN
EDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLW
DNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKICSWSLDMLSHP
QDSMELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQ
GPITGIHCHAAVGAVDFSHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSP
THPALFACVDGMGRLDLWNLNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEG
QIVIYDVGEQIAVPRNDEWARFGRTLAEINANRADAEEEAATRIPA"
BASE COUNT 814 a 469 c 569 g 710 t
ORIGIN
1 gtcagtttgt aaggcgaggg cggaagttgg attcctggcc tgagaatatt aggcgtagtt
61 ttccagtttt tggcaaagcg gaaatactta aggcccctgg gttgactggg ttctttgttt
121 tatctaccgg cttctgcttt acgacaggtc acaaacatgt cagacaaaag tgaattaaag
181 gctgagttgg aacgtaagaa gcagcgactg gcccaaatca gagaggaaaa gaagagaaaa
241 gaagaagaaa ggaaaaaaaa agaaacagac cagaagaagg aagctgttgc tcctgtgcaa
301 gaagaatcag atcttgaaaa aaaaaggaga gaagctgaag cattgcttca aagcatgggg
361 ctaactccag aatcccccat tgtccctcct cctatgtctc catcctccaa atctgtgagc
421 actccaagtg aagctggaag ccaagactct ggagatggcg ccgtgggatc tagacgagga
481 cctattaaac ttggaatggc taaaatcacg caagtcgact ttcctcctcg agaaattgtc
541 acgtatacaa aggaaactca gactccagtt atggctcaac ccaaagaaga tgaagaggaa
601 gatgatgatg tagtggctcc taaaccacct attgaacctg aagaagagaa aactttaaag
661 aaagatgagg aaaatgatag taaagctccc cctcatgagc tgactgaaga agaaaagcaa
721 caaatcttgc actctgagga atttttaagt ttctttgacc attctacaag aattgtagaa
781 agagctcttt ctgagcagat taacatcttc tttgactata gtgggagaga tttggaagac
841 aaagaaggag agattcaagc aggtgctaaa ctgtcattaa atcgacaatt ttttgacgaa
901 cgttggtcaa agcatcgggt ggttagttgt ttggattggt catctcagta tccggagtta
961 ctcgtggctt cctataacaa caatgaagat gcccctcatg agcctgatgg tgtggccctt
1021 gtatggaata tgaaatacaa aaaaactacc ccagagtatg tgtttcactg ccagtcagct
1081 gtgatgtctg ccacatttgc aaaatttcat ccaaatcttg ttgttggtgg tacatattca
1141 ggccaaattg tgctttggga taaccgtagc aataaaagaa ctccagtgca aagaactcca
1201 ctgtcagcag ctgcacacac acaccctgta tattgtgtaa atgttgttgg aacacaaaat
1261 gctcacaatc tgattagcat ctctactgat ggaaaaattt gttcatggag tctggacatg
1321 ctttcccatc cacaggatag catggagttg gttcataaac agtcaaaagc agtagctgtg
1381 acatctatgt ccttccctgt tggagatgtc aacaactttg ttgttgggag tgaagaaggt
1441 tctgtgtaca cagcatgccg ccatggcagc aaagctggaa tcagtgagat gtttgagggg
1501 catcaaggac caatcactgg catccattgt catgcagctg ttggagcagt agacttctca
1561 catctttttg tcacttcatc gtttgactgg acagtaaagc tttggacaac taagaataac
1621 aagcctttgt attcatttga agataatgca gactatgttt atgatgttat gtggtcacct
1681 acccacccag ccctgtttgc ctgtgtggat ggcatgggga gattggattt gtggaatctc
1741 aataatgaca cagaggtacc aactgccagc atttctgtgg agggtaatcc tgctcttaat
1801 cgtgtgagat ggacccattc tggcagagag attgctgtgg gtgattctga aggacagatt
1861 gttatatacg atgtgggaga gcagattgct gttccccgca atgatgaatg ggcacggttt
1921 ggccgaacac ttgcagaaat taatgcaaac cgagctgatg cagaggagga agcagctacc
1981 cgaatacctg cttagttcct gaaaagggga gtgtaactag tggatttggg aaaggttctt
2041 aagtagatcc tgagactatt tgcatgcttc tgtctaaatg ataattaaaa ggaaatttca
2101 tggattaaac catgggttta atgcagcaag gaaacttaca atgtcccttt atatataaca
2161 tgcatcttgt tttggatttg tgtcattttt taatatagct gattgacttc acagaaagca
2221 gcttttttga attctaatac ataggtgtat atttggtatt agttattttg agttcttttc
2281 aacttataac actgtataca gttatttcta aagcacagat gaaataagtt ctgcatattt
2341 ttaaataatc acagttccct gttatacaga taatgttctc actacccata atatgtagga
2401 acattgtttc tccttagccg tagtatgcat acacctatcc atgttcattc tgacatcctt
2461 tgttgtcttt ataattcatg tggtagttac ctataaataa aaacaaatat gcgttaaaaa
2521 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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