LOCUS       BC090954                6186 bp    mRNA    linear   HUM 18-AUG-2006
DEFINITION  Homo sapiens SET domain containing 2, mRNA (cDNA clone
            IMAGE:4397772), partial cds.
ACCESSION   BC090954
VERSION     BC090954.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6186)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 6186)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 200 Row: a Column: 6.
FEATURES             Location/Qualifiers
     source          1..6186
                     /db_xref="H-InvDB:HIT000334316"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4397772"
                     /tissue_type="Duodenum, adenocarcinoma"
                     /clone_lib="NIH_MGC_88"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..6186
                     /gene="SETD2"
                     /gene_synonym="FLJ22472"
                     /gene_synonym="FLJ23184"
                     /gene_synonym="HIF-1"
                     /gene_synonym="HSPC069"
                     /gene_synonym="HYPB"
                     /gene_synonym="KIAA1732"
                     /db_xref="GeneID:29072"
                     /db_xref="HGNC:HGNC:18420"
     CDS             <1..5538
                     /gene="SETD2"
                     /gene_synonym="FLJ22472"
                     /gene_synonym="FLJ23184"
                     /gene_synonym="HIF-1"
                     /gene_synonym="HSPC069"
                     /gene_synonym="HYPB"
                     /gene_synonym="KIAA1732"
                     /codon_start=1
                     /product="SETD2 protein"
                     /protein_id="AAH90954.1"
                     /db_xref="GeneID:29072"
                     /db_xref="HGNC:HGNC:18420"
                     /translation="GFQNISRCKEKDLDDTCMLHKKSESPFRETEPLVSPHQDKLMSM
                     PVMTVDYSKTVVKEPVDTRVSCCKTKDSDIYCTLNDSNPSLCNSEAENIEPSVMKISS
                     NSFMNVHLESKPVICDSRNLTDHSKFACEEYKQSIGSTSSASVNHFDDLYQPIGSSGI
                     ASSLQSLPPGIKVDSLTLLKCGENTSPVLDAVLKSKKSSEFLKHAGKETIVEVGSDLP
                     DSGKGFASRENRRNNGLSGKCLQEAQEEGNSILPERRGRPEISLDERGEGGHVHTSDD
                     SEVVFSSCDLNLTMEDSDGVTYALKCDSSGHAPEIVSTVHEDYSGSSESSNDESDSED
                     TDSDDSSIPRNRLQSVVVVPKNSTLPMEETSPCSSRSSQSYRHYSDHWEDERLESRRH
                     LYEEKFESIASKACPQTDKFFLHKGTEKNPEISFTQSSRKQIDNRLPELSHPQSDGVD
                     STSHTDVKSDPLGHPNSEETVKAKIPSRQQEELPIYSSDFEDVPNKSWQQTTFQNRPD
                     SRLGKTELSFSSSCEIPHVDGLHSSEELRNLGWDFSQEKPSTTYQQPDSSYGACGGHK
                     YQQNAEQYGGTRDYWQGNGYWDPRSGRPPGTGVVYDRTQGQVPDSLTDDREEEENWDQ
                     QDGSHFSDQSDKFLLSLQKDKGSVQAPEISSNSIKDTLAVNEKKDFSKNLEKNDIKDR
                     GPLKKRRQEIESDSESDGELQDRKKVRVEVEQGETSVPPGSALVGPSCVMDDFRDPQR
                     WKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACG
                     EDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTF
                     VLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEP
                     NCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGG
                     ENRVSIRAAGGKMKKERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLE
                     QKLTCLELIQNTHSQSCLKSFLERHGLSLLWIWMAELGDGRESNQKLQEEIIKTLEHL
                     PIPTKNMLEESKVLPIIQRWSQTKTAVPPLSEGDGYSSENTSRAHTPLNTPDPSTKLS
                     TEADTDTPKKLMFRRLKIISENSMDSAISDATSELEGKDGKEDLDQLENVPVEEEEEL
                     QSQQLLPQQLPECKVDSETNIEASKLPTSEPEADAEIELKESNGTKLEEPINEETPSQ
                     DEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKENTTTE
                     RGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLSPPSSAYERGTKRPDD
                     RYDTPTSKKKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQNLGMTSPLPYDSL
                     GYNAPHHPFAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPVCSPAPYDHAQPLVGHS
                     TEPLSAPPPVPVVPHVAAPVEVSSSQYVAQSDGVVHQDSSVAVLPVPAPGPVQGQNYS
                     VWDSNQQSVSVQQQYSPAQSQATIYYQGQTCPTVYGVTSPYSQTTPPIVQSYAQPSLQ
                     YIQGQQIFTAHPQGVVVQPAAAVTTIVAPGQPQPLQPSEMVVTNNLLDLPPPSPPKPK
                     TIVLPPNWKTARDPEGKIYYYHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYD
                     ENPMKASKKPKTAEADTSSELAKKSKEVFRKEMSQFIVQCLNPYRKPDCKVGRITTTE
                     DFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKYMQKFGAVYKPKEDT
                     ELE"
BASE COUNT         1991 a         1268 c         1434 g         1493 t
ORIGIN      
        1 ggatttcaga atattagtag gtgcaaagaa aaagacttgg atgatacctg catgctgcat
       61 aagaagtcag aaagcccatt tagagaaaca gaacctctgg tgtcaccaca ccaagataaa
      121 ctcatgtcta tgccagttat gactgtggat tattccaaaa cagtagttaa agaaccagtt
      181 gatacgaggg tttcttgctg caaaaccaaa gattcagaca tatactgtac tttgaacgat
      241 agcaaccctt ctttgtgtaa ctctgaagct gaaaatattg agccttcagt tatgaagatt
      301 tcttcaaata gctttatgaa tgtgcatttg gaatcaaaac cagttatatg tgatagtaga
      361 aatttgacag atcactcaaa atttgcatgt gaagaatata agcagagcat cggtagcact
      421 agttcagctt ctgttaatca ttttgatgat ttatatcaac ctattgggag ttcaggtatt
      481 gcttcatctc ttcagagtct tccaccagga ataaaggtgg acagtctaac tctcttgaaa
      541 tgcggagaga acacatctcc agttctggat gcagtgctaa agagtaaaaa aagttcagag
      601 tttttaaagc atgcagggaa agaaacaata gtagaagtag gtagtgacct tcctgattca
      661 ggaaagggat ttgcttccag ggagaacagg cgtaataatg ggttatctgg gaaatgtttg
      721 caagaggctc aagaagaagg gaattccata ttgcctgaaa gaagaggaag accagaaatc
      781 tctttagatg aaagaggaga aggaggacat gtgcatactt ctgatgactc agaagttgta
      841 ttttcttctt gtgatttgaa tttaaccatg gaagacagtg atggtgtaac ttatgcatta
      901 aagtgtgaca gtagtggtca tgccccagaa attgtgtcta cagttcatga agattattct
      961 ggctcttctg aaagttcaaa tgatgaaagt gattcagaag atacagattc ggatgatagc
     1021 agtattccaa gaaaccgtct ccagtctgtt gtggttgtgc caaagaattc tactttgccc
     1081 atggaagaaa caagtccttg ttcttctcgg agcagtcaaa gttatagaca ctattctgac
     1141 cattgggaag atgagagatt ggagtcaagg agacatttgt atgaggaaaa atttgaaagt
     1201 atagcaagta aagcctgtcc tcaaactgat aagtttttcc ttcataaagg aacagagaag
     1261 aatccggaaa tttcttttac acagtccagt agaaaacaaa tagataaccg cctgcctgaa
     1321 ctttctcatc ctcagagtga tggggttgat agtacaagtc atacagatgt gaaatctgac
     1381 cctctgggtc acccaaattc agaggaaacc gtgaaagcca aaataccttc taggcagcaa
     1441 gaagagctgc caatttattc ttctgatttt gaagatgtcc caaataagtc ttggcaacag
     1501 accactttcc aaaacaggcc agatagtaga ctgggaaaaa cagaattgag tttttcttcc
     1561 tcttgtgaga taccacatgt ggatggcttg cactcatcag aagagctcag aaacttaggt
     1621 tgggacttct ctcaagaaaa gccttctacc acgtatcagc aacctgacag tagctatgga
     1681 gcttgtggtg gacacaagta tcagcaaaat gcagaacagt atggtgggac acgtgattac
     1741 tggcaaggca atggttactg ggatccaaga tcaggtagac ctcctggaac tggggttgtg
     1801 tatgatcgaa ctcaaggaca agtaccagat tccctaacag atgatcgtga agaagaggag
     1861 aattgggatc aacaggatgg atcccatttt tcagaccagt ccgataaatt tcttctatcc
     1921 cttcagaaag acaaggggtc agtgcaagca cctgaaataa gcagcaattc cattaaggac
     1981 actttagctg tgaatgaaaa gaaagatttt tcaaaaaact tagaaaaaaa tgatatcaaa
     2041 gatagagggc ctcttaaaaa aaggaggcag gaaatagaga gtgattctga aagtgatggt
     2101 gagcttcagg acagaaagaa agttagagtg gaggtagagc agggagagac atcagtgccc
     2161 ccaggttcag cactggttgg gccctcctgt gtcatggatg acttcaggga cccacagcga
     2221 tggaaggaat gtgccaagca agggaaaatg ccatgttact ttgatcttat tgaagaaaat
     2281 gtttatttaa cagaaagaaa gaagaataaa tctcatcgag atattaagcg aatgcagtgt
     2341 gagtgtacac ctctttctaa agatgaaaga gctcaaggtg aaatagcatg tggggaagat
     2401 tgtcttaatc gtcttctcat gattgaatgt tcttctcggt gtccaaatgg ggattattgt
     2461 tccaatagac ggtttcagag aaaacagcat gcagatgtgg aagtcatact cacagaaaag
     2521 aaaggctggg gcttgagagc tgccaaagac cttccttcga acacctttgt cctagaatat
     2581 tgtggagagg tactcgatca taaagagttt aaagctcgag tgaaggagta tgcacgaaac
     2641 aaaaacatcc attactattt catggccctg aagaatgatg agataataga tgccactcaa
     2701 aaaggaaatt gctctcgttt catgaatcac agctgtgaac caaattgtga aacccaaaaa
     2761 tggactgtga acggacaact gagggttggg ttttttacca ccaaactggt tccttcaggc
     2821 tcagagttaa cgtttgacta tcagttccag agatatggaa aagaagccca gaaatgtttc
     2881 tgcggatcag ccaattgccg gggttacctg ggaggagaaa acagagtcag catcagagca
     2941 gcaggaggga aaatgaagaa ggaacgatct cgtaagaagg attcagtgga tggagagcta
     3001 gaagctctga tggaaaatgg tgagggtctc tctgataaaa accaggtgct cagcttatcc
     3061 cggctaatgg ttagaattga aactttggag cagaaactta cctgtctgga actcatacag
     3121 aacacacact cacagtcctg cctgaagtcc tttctggaac gtcatgggct gtctttgttg
     3181 tggatctgga tggcagagct aggtgacggc cgggaaagta accagaagct tcaggaagag
     3241 attataaaga ctttggaaca cttgcccatt cctactaaaa atatgttgga ggaaagcaaa
     3301 gtacttccaa ttattcaacg ctggtctcag actaagactg ctgtccctcc gttgagtgaa
     3361 ggagatgggt attctagtga gaatacatcg cgtgctcata caccactcaa cacacctgat
     3421 ccttccacca agctgagcac agaagctgac acagacactc ccaagaaact aatgtttcgc
     3481 agactgaaaa ttataagtga aaatagcatg gacagtgcaa tctctgatgc aaccagtgag
     3541 ctagaaggca aggatggcaa agaggatctt gatcaattag aaaatgtccc tgtagaggaa
     3601 gaggaagaat tgcagtcaca acagctactc ccacaacagc tgcctgaatg caaagttgat
     3661 agtgaaacca acatagaagc tagtaagcta cctacatctg aaccagaagc tgacgctgaa
     3721 atagagctca aagagagcaa cggcacaaaa ctagaagaac ctattaatga agaaacacca
     3781 tcccaagatg aagaggaggg tgtgtctgat gtggagagtg aaaggagcca agaacagcca
     3841 gataaaacag tggatataag tgatttggcc accaaactcc tggacagttg gaaagaccta
     3901 aaggaggtat atcgaattcc aaagaaaagt caaactgaaa aggaaaacac aacaactgaa
     3961 cgaggaaggg atgctgttgg cttcagagat caaacacctg ccccgaagac tcctaatagg
     4021 tcaagagaga gagacccaga caagcaaact caaaataaag agaaaaggaa acgaagaagc
     4081 tccctctcac caccctcttc tgcctatgag cggggaacaa aaaggccaga tgacagatat
     4141 gatacaccaa cttctaaaaa gaaagtacga attaaagacc gcaataaact ttctacagag
     4201 gaacgccgga agttgtttga gcaagaggtg gctcaacggg aggctcagaa acaacagcaa
     4261 cagatgcaga acctgggaat gacatcacca ctgccctatg actctcttgg ttataatgcc
     4321 ccgcatcatc cctttgctgg ttacccacca ggttatccca tgcaggccta tgtggatccc
     4381 agcaacccta atgctggaaa ggtgctcctg cccacaccca gcatggaccc agtgtgttct
     4441 cctgctcctt atgatcatgc tcagcccttg gtgggacatt ctacagaacc cctttctgcc
     4501 cctccaccag taccagtggt gccacatgtg gcagctcctg tggaagtttc cagttcccag
     4561 tatgtggccc agagtgatgg tgtagtacac caagactcca gcgttgctgt cttgccagtg
     4621 ccggcccccg gcccagttca gggacagaat tatagtgttt gggattcaaa ccaacagtct
     4681 gtcagtgtac agcagcagta ctctcctgca cagtctcaag caaccatata ttatcaagga
     4741 cagacatgtc caacagtcta tggtgtgaca tcaccttatt cacagacaac tccaccaatt
     4801 gtacagagtt atgcccagcc aagtcttcag tatatccagg ggcaacagat tttcacagct
     4861 catccacaag gagtggtggt acagccagcc gcagcagtga ctacaatagt tgcaccaggg
     4921 cagcctcagc ccttgcagcc atctgaaatg gttgtgacaa ataatctctt ggatctgccg
     4981 cccccctctc ctcccaaacc aaaaaccatt gtcttacctc ccaactggaa gacagctcga
     5041 gatccagaag ggaagattta ttactaccat gtgatcacaa ggcagactca gtgggatcct
     5101 cctacttggg aaagcccagg agatgatgcc agccttgagc atgaagctga gatggacctg
     5161 ggaactccaa catatgatga aaaccccatg aaggcctcga aaaagcccaa gacagcagaa
     5221 gcagacacct ccagtgaact agcaaagaaa agcaaagaag tattcagaaa agagatgtcc
     5281 cagttcatcg tccagtgcct gaacccttac cggaaacctg actgcaaagt gggaagaatt
     5341 accacaactg aagactttaa acatctggct cgcaagctga ctcacggtgt tatgaataag
     5401 gagctgaagt actgtaagaa tcctgaggac ctggagtgca atgagaatgt gaaacacaaa
     5461 accaaggagt acattaagaa gtacatgcag aagtttgggg ctgtttacaa acccaaagag
     5521 gacactgaat tagagtgact gttgggccag ggtgggagga tgggtggtca ggtaagacag
     5581 actctaggga gaggaaatcc tgtgggcctt tctgtcccac ccctgtcagc actgtgctac
     5641 tgatgataca tcaccctggg gaattcaacc ctgcagatgt caactgaagg ccacaaaaat
     5701 gaactccatc tacaagtgat tacctagttg tgagctgttg gcatgtggtt agaagccatc
     5761 agaggtgcaa gggcttagaa aagaccctgg ccagacctga ctccactctt aaacctgggt
     5821 cttctccttg gcggtgctgt cagcgcacag acccatgcgc atccccaccc acaacccttt
     5881 accctgatga tctgtattat attttaatgt atatgtgaat atattgaaaa taatttgttt
     5941 tttcctggtt tttgtttggt tttcgttttg cttttagcct ctacatgcta ggatcacagg
     6001 aagactttgt aaggacagtt taagttctcc tgcaaggttt aatttgttat catgtaaata
     6061 ttccaaagca ggctgccttg tggttttggc cagccttgtg ctatgttgat aagattgatt
     6121 tactgcttaa aatcacttta ctttatccaa tttttactga actttttatg taaaaaaaaa
     6181 aaaaaa
//