LOCUS       BC090919                 400 bp    mRNA    linear   HUM 18-AUG-2006
DEFINITION  Homo sapiens UPF2 regulator of nonsense transcripts homolog
            (yeast), mRNA (cDNA clone IMAGE:30371337), partial cds.
ACCESSION   BC090919
VERSION     BC090919.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
            cDNA Library Preparation: CLONTECH Laboratories, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 68 Row: b Column: 9
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18375674.
FEATURES             Location/Qualifiers
     source          1..400
                     /db_xref="H-InvDB:HIT000334281"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:30371337"
                     /tissue_type="Skin and meninges pool- skin, dura matter,
                     pia matter, choroid plexus."
                     /clone_lib="NIH_MGC_186"
                     /lab_host="DH10B"
                     /note="Vector: pDNR-LIB"
     gene            1..>400
                     /gene="UPF2"
                     /gene_synonym="DKFZP434D222"
                     /gene_synonym="HUPF2"
                     /gene_synonym="KIAA1408"
                     /gene_synonym="RENT2"
                     /db_xref="GeneID:26019"
                     /db_xref="HGNC:HGNC:17854"
                     /db_xref="MIM:605529"
     CDS             74..>400
                     /gene="UPF2"
                     /gene_synonym="DKFZP434D222"
                     /gene_synonym="HUPF2"
                     /gene_synonym="KIAA1408"
                     /gene_synonym="RENT2"
                     /codon_start=1
                     /product="UPF2 protein"
                     /protein_id="AAH90919.1"
                     /db_xref="GeneID:26019"
                     /db_xref="HGNC:HGNC:17854"
                     /db_xref="MIM:605529"
                     /translation="MPAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLT
                     AKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEKKK
                     KKKKKKK"
BASE COUNT          192 a           59 c          109 g           40 t
ORIGIN      
        1 gagcgctgga gttggtgctg ggaaacccgg ggctaatgtt gacaacaggc tcgagattgt
       61 cctgggtcac ataatgccag ctgagcgtaa aaagccagca agtatggaag aaaaagactc
      121 tttaccaaac aacaaggaaa aagactgcag tgaaaggcgg acagtgagca gcaaggagag
      181 gccaaaagac gatatcaagc tcactgccaa gaaggaggtc agcaaggccc ctgaagacaa
      241 gaagaagaga ctggaagatg ataagagaaa aaaggaagac aaggaacgca agaaaaaaga
      301 cgaagaaaag gtgaaggcag aggaagaatc aaagaaaaaa gaagaggaag aaaaaaagaa
      361 acatcaagag aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//