LOCUS       BC090907                1110 bp    mRNA    linear   VRT 15-JUL-2006
DEFINITION  Danio rerio zgc:103638, mRNA (cDNA clone MGC:103638 IMAGE:7255405),
            complete cds.
ACCESSION   BC090907
VERSION     BC090907.1
KEYWORDS    MGC.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1110)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1110)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: William S. Talbot, Stanford University
            cDNA Library Preparation: Dr. Sumio Sugano
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 192 Row: l Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 60552544.
FEATURES             Location/Qualifiers
     source          1..1110
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /db_xref="taxon:7955"
                     /clone="MGC:103638 IMAGE:7255405"
                     /tissue_type="Larvae, whole, 5 day old, mixed wild type,
                     650 pooled"
                     /clone_lib="NIH_ZGC_19"
                     /lab_host="DH10B"
                     /note="Vector: pME18S-FL3"
     gene            1..1110
                     /gene="zgc:103638"
                     /db_xref="GeneID:541394"
                     /db_xref="ZFIN:ZDB-GENE-050320-93"
     CDS             169..516
                     /gene="zgc:103638"
                     /codon_start=1
                     /product="zgc:103638"
                     /protein_id="AAH90907.1"
                     /db_xref="GeneID:541394"
                     /db_xref="ZFIN:ZDB-GENE-050320-93"
                     /translation="MVYDDANKKWVPAGGSTGFSRVHIYHHTGNNAFRVVGRKIQDHQ
                     VVINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDASVFASAMMHALEVLNSQD
                     AGEKALFTAGCEV"
BASE COUNT          311 a          233 c          277 g          289 t
ORIGIN      
        1 atagacccgt ctggcggctg acagcttcca ggacacctcg ggctctgagg aatctggaca
       61 ctttggagaa gaacaggagt agacaggctc cttgcgggtg gaggtttgga acacgcagca
      121 atgacacgtg atgttgagca gagtatctgt caggcgaggg ccgctgtcat ggtttatgat
      181 gacgccaata agaagtgggt tccggctggt ggatccacag gctttagcag agtccacatc
      241 tatcaccaca ctggcaacaa cgccttccga gtagtgggcc gtaaaattca ggaccaccag
      301 gtggtaataa actgtgccat tcccaagggg ctgaaataca accaggccac gcaaaccttt
      361 caccagtggc gagatgcacg gcaggtgtac ggccttaact ttggcagcaa agaggatgcc
      421 agtgtatttg ccagtgccat gatgcatgcc ctagaggtgc tgaactctca ggatgcaggt
      481 gagaaagccc ttttcactgc agggtgcgaa gtttaactac atgtgaattg tgtgagctcg
      541 gctgtgtatt atgatgctgt aatgctgcat ttatagtgac acttgaagaa tcatgtcata
      601 tatctctatg catagatagt tggacggacg gacggacgga cggactgaca gacagacaga
      661 tagataaaaa aaaaaaatgc tgaattaaca atgtaacaat gctgtttact gtgaaattca
      721 catttgaatc tcaggctctc agagagaagc tgtggggaac atagagaaat gtctgctcag
      781 ctcctgttgc ctcagggaga gcatctttaa tgaagacgat tcgccttttg ggattttcat
      841 ctctccctct tctcatctgc cttccagctg atccctcttg cctccatatt cctccatatt
      901 ccttattcat acactttctc tccgaataga tgctaggtat gcatttacag tagctgtact
      961 tcgtcctggt gttgaggata acatataatt ataattgaaa gtagttcaaa gagattatga
     1021 cttttgctgc tggtgataat aaatctgaga gaaaggttta tgttgggagt gagaatctca
     1081 tcgcgttcat gcgaaaaaaa aaaaaaaaaa
//