LOCUS BC090894 2528 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 54, mRNA (cDNA clone
MGC:103014 IMAGE:30377779), complete cds.
ACCESSION BC090894
VERSION BC090894.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38348267.
FEATURES Location/Qualifiers
source 1..2528
/db_xref="H-InvDB:HIT000334278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:103014 IMAGE:30377779"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2528
/gene="C19orf54"
/gene_synonym="FLJ41131"
/db_xref="GeneID:284325"
/db_xref="HGNC:HGNC:24758"
CDS 405..944
/gene="C19orf54"
/gene_synonym="FLJ41131"
/codon_start=1
/product="C19orf54 protein"
/protein_id="AAH90894.1"
/db_xref="GeneID:284325"
/db_xref="HGNC:HGNC:24758"
/translation="MRAGGLVDGRYSPVAPQWRPPGETHTGGHGKRLHGPGRDVLSTS
YDEDFNHEPCQRKGHKAHWAVSAGVLLGVRAVPSLGYTEDPELPGLFHPVLGTPCQPP
SLPEEGSPGAVYLLSKQGKSWHYQLWDYDQVRESNLQLTDFSPSRATDGRVYVVPVGG
VRAGLCGQALLLTPQDCSH"
BASE COUNT 514 a 786 c 641 g 587 t
ORIGIN
1 ccgccatttt ccgggagtgg gaggtgcact ttacttcctg actcctttcc tttttccagt
61 ggttatcgcg gcgcccaccg gcctctgatc tctgagtctt ctccaaccca cagacgtttt
121 ttgttgctct ggttccagga ccttctccac aactaggcca ttttccctgc caggtgtcct
181 ttttgacctc ttgacctctg actcaaaggg cctgctcccc ctcatgtctt cggcctggag
241 aagagccagc tcctgaagga ggcctttgat aaggccggcc cggtccccaa gggcagagaa
301 gatgtgaaga ggcttctgaa actacacaag gaccggttcc gaggtgacct gcggtggatc
361 ctcttctgtg cagacctgcc gtccctcatc caagaaggcc ctcaatgcgg gctggtggcc
421 ttgtggatgg caggtactct cctgtcgccc cccagtggcg tccccctgga gagactcata
481 cgggtggcca cggaaagagg ctacacggcc cagggagaga tgttctcagc accagctacg
541 acgaggactt caaccatgag ccgtgtcaga ggaagggcca caaggcacac tgggcggtga
601 gtgcaggggt cctgctgggt gttcgggctg tgcccagtct cggctacact gaggaccctg
661 agctgccggg cctgttccac ccagtgctgg gcacgccctg ccaaccacca tccctgccag
721 aggagggctc cccgggagct gtctacctgc tgtccaagca gggcaagagt tggcactatc
781 agctgtggga ctacgaccag gtccgggaga gcaacctgca gctgacggac ttctcgccct
841 cacgggccac tgacggccgg gtgtacgtgg tgcccgtggg tggggtacgg gctggcctct
901 gtggccaggc cctgctcctc acaccacagg actgcagcca ttagctgcgg ctgcggtctc
961 aggctgcagc ctagctcggt aaccatttga agtgtgccta cacttctccc actgtgtgat
1021 ggcgacaaga ttgaagctag gtctcagggg tctccagtcc tccttcatca gggccacccc
1081 ctgcagtatt gagcaccagc tggtccctct agggagagat tgacaacagc ccggaccctg
1141 cggcctgcct attccatctg aatgtcgcat cgtctgtttc tcactagggg ccgcctctgt
1201 catctcacta gacatttgag gaacctcctg cctgggccct ctgcttctca caggacaggg
1261 acactgaact gcgtcagcct cagctcaccc ctccttagcc caaggtcttc ctcatgcttg
1321 ccacctacta gtcatactgg ccttttagat ccctgaagtg ttgttcaaat ccccggatca
1381 ttgagtccca cccccagccc tctgctgcgg atcactcctt aacttttcca ttggggctca
1441 ggtatcacta cctcagggaa gagtcctgca gccccagtca agacacccct cccccacctc
1501 atgtcttcac agttttaaag cccatctggg agcagttacc tgtgccagcc cctctacctg
1561 tgttagcaga tctggcaacc ctgtaagggg ggtgctagat ggacccgatt tgacagatgg
1621 caagactgag gcctggagaa gtggaatcac tggcctgagg tcacatgact agcacatggc
1681 aaggtcagga ttcaagctag gtagtcagta tctcagccag gctgtctcct ggctccctga
1741 acattatggt gctgaccaca aactttcctg tccacttata caaacttcta gtgagtgtgt
1801 gtgattacta gcttcatgaa tacctgaccc ctccactctg aaggaggaac aggcctgtct
1861 ggatcacttc tctgtcccta actgagccca tctcatttag ggaaactaca gagcactgtt
1921 gctttttttt tttagatgga gtctcgttct gtcgtccagg ctggagtgcg gtggcgtgat
1981 ctcagctcac tccagcctcc acttcccagg ttcaagtgat tctcctgcct cagcccccca
2041 agtaactggg attacaggca tgcaccacca tgcctggcta attttttgta tttttagtag
2101 agacggggct ttgccatgtt ggccaggctg gtctcgaact cctgaccttg agtaatccac
2161 ccgccccggc ctcccaaagt gctgggatta caggtgtgag ccactgagcc cggccacagt
2221 gcagtatttc taaccagtga tcagggtaaa gaggatgcgt gtccaccatc ccagccctga
2281 tcagcctgtc tgtgcatccc ccatcccagc cagggcttgg agcagccttg ctcaccactg
2341 tgtcccctgc attgtaacac atccaggcac aagaatagcc gcccagtgac tgccaagtga
2401 gtgaaccagc ctgcttggag cctgcctctt tcccaaactg ctcattatcc tgttacccca
2461 cccagcccac gtgtccaaat acactccaga tgcaaaataa aaagctctac gacaaaaaaa
2521 aaaaaaaa
//