LOCUS BC090889 3572 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens AHNAK nucleoprotein 2, mRNA (cDNA clone
IMAGE:30387958), complete cds.
ACCESSION BC090889
VERSION BC090889.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3572)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3572)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: h Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..3572
/db_xref="H-InvDB:HIT000334273"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30387958"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..3572
/gene="AHNAK2"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
CDS 329..2626
/gene="AHNAK2"
/codon_start=1
/product="AHNAK2 protein"
/protein_id="AAH90889.1"
/db_xref="GeneID:113146"
/db_xref="HGNC:HGNC:20125"
/db_xref="MIM:608570"
/translation="MKASKSGVSLPQRDVDPSLSSATAGGSFQDTEKASSDGGRGGLG
ATASATGSEGVNLHRPQVHIPSLGFAKPDLRSSKAKVEVSQPEADLPLPKHDLSTEGD
SRGCGLGDVPVSQPCGEGIAPTPEDPLQPSCRKPDAEVLTVESPEEEAMTKYSQESWF
KMPKFRMPSLRRSFRDRGGAGKLEVAQTQAPAATGGEAAAKVKEFLVSGSNVEAAMSL
QLPEADAEVTASESKSSTDILRCDLDSTGLKLHLSTAGMTGDELSTSEVRIHPSKGPL
PFQMPGMRLPETQVLPGEIDETPLSKPGHDLASMEDKTEKWSSQPEGPLKLKASSTDM
PSQISVVNVDQLWEDSVLTVKFPKLMVPRFSFPAPSSEDDVFIPTVREVQCPEANIDT
ALCKESPGLWGASILKAGAGVPGEQPVDLNLPLEAPPISKVRVHIQGAQVESQEVTIH
SIVTPEFVDLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTM
TQHSRTQEGTEEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQTLTFEVPSG
HQLADSCSDEEPAEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGF
SSSVDETGVDSKNDVQRSAPIQTQPEARPEAELPKKQEKAGWFRFPKLGFSSSPTKKS
KSTEDGAELEEQKLQEETITFFDARESFSPEEKEEGELIGPVGTGLDSRVMVTSAART
ELILPEQDRKADDESKGSGLGPNEG"
BASE COUNT 1080 a 876 c 879 g 737 t
ORIGIN
1 gacaggatgc gtcctcaaaa gcggacagag tgctccactg acctgcagcc tccagaggga
61 gttccaacat ctcaagctga gagtcactct ggcccactga attccatgat tcctgtttct
121 cttggtcagg tggtccccga agaaggaaac agggccaaag gtggacccag aatgcagcgt
181 ggaggactca aaactcagcc tggttttaga caaggatgaa gtggccccgc agtctgccat
241 ccacatggat ctgcctcctg agagggatgg agagaagggg aggagcacaa agcctggctt
301 tgccatgcca aaacttgcac ttcccaaaat gaaggcttct aagagtgggg tcagcctgcc
361 acagagagac gtggatcctt ccctttctag tgccacagca gggggtagct ttcaagacac
421 agaaaaggcc agcagtgacg gtggtagggg aggacttggt gcaacagcaa gtgccacagg
481 aagtgagggt gtgaacctcc accggccaca ggtccacatt cccagtttgg gctttgccaa
541 acctgatctc agatcctcca aggccaaggt ggaggtgagc cagcctgaag ctgacctgcc
601 tcttcccaaa catgatctgt ctaccgaagg tgacagcaga ggatgtgggc tcggggatgt
661 cccagtgagc cagccttgtg gggaggggat agcccccaca cctgaagatc ccctccagcc
721 atcctgtaga aaaccagatg ctgaagtcct cacagtggaa agcccagagg aggaagccat
781 gaccaagtac tcgcaggaaa gctggtttaa aatgcccaag ttccgcatgc ccagccttag
841 gcgctctttc agggacagag gcggggctgg aaagctggaa gtggctcaga cacaggcacc
901 ggcagcaaca gggggtgaag cagcagctaa agtcaaagag ttccttgttt ctgggtcaaa
961 cgtggaggca gctatgtccc tacagctccc agaggcagat gcagaagtga cagcttctga
1021 gagcaaatca tccacagata ttctaaggtg tgatcttgac agcacaggct tgaagctgca
1081 cctctccact gctgggatga ctggggatga gctttccact tctgaggtca ggatccatcc
1141 atccaaagga cctctccctt ttcagatgcc tggcatgagg cttccagaaa cccaggttct
1201 tccaggagaa atagatgaga ctcctctttc caagccagga catgaccttg ccagcatgga
1261 ggataaaaca gagaaatggt cttcccagcc tgaaggtcca cttaaattga aagcttcaag
1321 tactgatatg ccatcccaga tttctgtggt taatgtggat caactgtggg aagattctgt
1381 cctaactgtc aaattcccca aattaatggt accaaggttc tccttccctg cccccagctc
1441 agaggatgat gtgttcatcc ccactgtgag ggaagtgcag tgtccagagg ccaatattga
1501 tacagccctt tgtaaggaaa gtccggggct ctggggagcc agcatcctga aggcaggtgc
1561 tggggtccct ggggagcagc ctgtggacct taacctgcct ttggaagctc ccccaatttc
1621 aaaggtcaga gtgcatattc agggtgctca ggttgaaagt caagaggtca ctatacacag
1681 catagtgaca ccagagtttg tagatctctc agtacccagg actttttcca ctcagattgt
1741 gcgggaatca gagatcccca cgtcagagat tcaaacacct tcgtacggat tttccttatt
1801 aaaagtgaaa atcccagagc cccacacgca ggctagagtg tacacaacaa tgactcaaca
1861 ctctaggact caggagggca cagaagaggc tcccatacaa gccaccccag gagtagactc
1921 catttctgga gatctccagc ctgacactgg agaaccattt gagatgatct cttccagcgt
1981 caatgtactg ggacagcaaa cactcacatt tgaagttcct tctggccacc agcttgcaga
2041 cagctgttca gatgaggagc cagcagaaat tcttgagttt ccccctgatg atagccaaga
2101 ggcaaccaca ccactggcag atgaaggcag ggctccaaaa gacaaaccag aaagtaaaaa
2161 atctggtctg ctctggtttt ggcttccaaa cattgggttt tcctcttctg ttgatgagac
2221 aggtgttgat tccaaaaatg acgtccagag atctgctccc attcaaacac agcctgaggc
2281 acgaccagag gcagaactgc ctaaaaaaca ggagaaggca ggctggttcc gatttcccaa
2341 attagggttc tcctcatctc ctaccaagaa aagcaaaagc accgaagatg gggcagagct
2401 ggaagaacaa aaacttcaag aagaaacaat cacgtttttt gatgcccgag aaagtttctc
2461 ccctgaagag aaggaagagg gtgaactgat cgggcctgtg ggcactgggc tggactccag
2521 agtgatggtg acatccgcgg caagaacaga gttaatcctg cccgagcagg acagaaaagc
2581 tgacgatgaa agcaaagggt caggcctggg accaaatgaa ggctgagagg tatggctcat
2641 cagtacaaga gagatgcaaa aaactaagtt ggaaagtaaa ggctacacac acatatggag
2701 caccccatcc cacagcacat tacatccacc tcacttcaca gaacggagaa cagagcagaa
2761 atgaccagaa cacctttgtc accatcacac agccctccta aaatggaacc aaagcttccc
2821 agctccctca aagctttgga tgcaaagaag gcaccctgac ttccacaaga caccagaatt
2881 cacacggtac tcagaggcac tgctggggaa gtttgttggt ctttattaga taaatttcca
2941 gagacctgtc cataataccc aacagaacat gactgtttct ttgaggaaag ggttataatg
3001 tctgtggtgt acaagtcgtt tttggtataa cttctttcct gctgctgctg cttcccggca
3061 aacatagttt tcctatttca ggcagagtgc ggtatattcc aggaaacact gtttcctact
3121 cacttagctt acttctttgt tgaatgcctc actaatggca agtttcaaga tgttttgggt
3181 gacaatgcac acatgctggg caaaagggtg atggccagtg gctggcagct gggccagcag
3241 aagctaggac atctgtgagt tgtcattctc atctatccat gtccactggc ctgccagcat
3301 ccgccagtgc cttgccagtg tgcacggtcc cacactgtgg cccctgagtc ccctaatgta
3361 cacgctgcag ccagaatgca gatggagctg gcttggctgt tccctggatg ggcaataaag
3421 aaagtgctgc atcccaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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