LOCUS BC090879 1734 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens non-protein coding RNA 153, mRNA (cDNA clone
IMAGE:30393672), partial cds.
ACCESSION BC090879
VERSION BC090879.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Jun 14, 2005 this sequence version replaced BC090879.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: j Column: 17.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000334263"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30393672"
/tissue_type="Pituitary"
/clone_lib="NIH_MGC_179"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene <1..1734
/gene="NCRNA00153"
/gene_synonym="HT013"
/db_xref="GeneID:55857"
/db_xref="HGNC:HGNC:15865"
CDS <1..1560
/gene="NCRNA00153"
/gene_synonym="HT013"
/codon_start=1
/product="NCRNA00153 protein"
/protein_id="AAH90879.2"
/db_xref="GeneID:55857"
/db_xref="HGNC:HGNC:15865"
/translation="PATIFMGRQMSAILSMRDFSTEHKSPQPTKNFSIPDPHSHRQTA
QSSNVTDSCVVQTSNDTQCLNKSDNIDGKASLQIGEKTPVTASVLSEEEQTHCLEIGS
NTRHGKSNLSEGKKSAELNSPLRERLSPENRTTDLKCDSSSGSEGEILTREHIEVEEK
RASPPVSPIPVSEYCESENKWSQEKHSPWEGVSDHLAHREPKSQKPFRKMQEEEEESW
STSSDLTISISEDDLILESPEPQPNPGGKMEGEDGIEALKLIHAEQERVALSTEKNCI
LQTLSSPDSEKESSTNAPTREPGQTPDSDVPRAQVGQHVATLKEHDNSVKEEATALLR
KALTEECGRRSAIHSSESSCSLPSILNDNSGIKEAKPAVWLNSVPTREQEVSSGCGDK
SKKENVAADIPITETEAYQLLKKATLQDNTNQTENRFQKTDASVSHLSGLNIGSGAFE
TKTANKIASEASFSSSEGSPLSRHENKKKPVINLKSNALWDESDDSNSEIEAALRPRN
HNTDDSDDFYD"
BASE COUNT 690 a 335 c 357 g 352 t
ORIGIN
1 ccagcaacaa tctttatggg ccgccaaatg tcagccatct taagcatgag agatttcagt
61 acagagcaca aatctcccca gcccacaaag aacttttcaa ttcctgaccc acattcacac
121 cgacagacag cccagagcag taatgtgaca gacagctgtg tagtacaaac tagtaatgac
181 acacagtgct taaataagtc tgacaacata gatggaaagg catctcttca gattggtgag
241 aaaacgccag tcacagccag tgtattgtct gaggaggaac aaactcattg cttggagata
301 ggaagtaaca cacgtcatgg caagagtaat ttatctgaag gcaaaaagtc tgctgaactc
361 aattccccgt tacgggaaag attaagtcca gagaacagaa ccactgattt aaagtgtgac
421 agttccagcg gatcagaggg agaaatactg acacgggaac atattgaagt tgaggaaaaa
481 agagccagcc cgccagtctc tccgatacca gtttcagaat actgtgaatc tgaaaataag
541 tggtctcaag agaagcattc tccttgggaa ggtgtttcag atcatcttgc tcacagggaa
601 ccaaagtcac aaaagccctt cagaaaaatg caggaagagg aggaggaaag ttggagcacc
661 agcagtgacc ttaccatttc aataagtgaa gatgatctga ttttagagag cccagaacca
721 cagccaaatc caggtggcaa gatggaggga gaagatggaa tagaggcctt aaaattaatc
781 catgctgagc aagaaagagt tgccctatcc actgaaaaaa attgtatttt gcaaacccta
841 agctctcctg attcagaaaa ggaatcctcc actaacgcac caacaagaga acctggacaa
901 acaccagact cagacgtacc gagggcacag gtgggtcagc atgttgccac cttgaaagaa
961 catgataatt ctgtcaaaga agaggcaaca gcattattga gaaaagccct tacagaagag
1021 tgtggccgta ggtcagctat tcacagtagt gaatcatctt gcagcttgcc atctattctg
1081 aatgacaata gtggaataaa ggaagccaaa cctgctgtat ggctcaacag tgttcctaca
1141 agggaacaag aagtttcaag tggctgtgga gacaagagca agaaagaaaa tgtggctgca
1201 gatatcccaa tcacagaaac agaagcctat cagttgctga agaaggccac ccttcaggat
1261 aatacaaatc aaactgaaaa caggtttcaa aagacagatg cttctgtgtc acacttgtca
1321 ggtttgaata ttggcagcgg tgcattcgag acaaagacag ctaacaaaat tgcttcggaa
1381 gctagttttt catctagtga aggaagtcct ttgtcaaggc atgaaaacaa aaagaaaccc
1441 gtgatcaatt taaaatctaa tgccctctgg gatgagtctg atgacagtaa ctcagaaatt
1501 gaggctgctt tacgccccag aaaccataac accgatgatt ctgatgattt ttatgactaa
1561 cgtgctgtga cattggtttc aaataaagtc tttaaacaaa ctaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1681 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//