LOCUS BC090857 3031 bp mRNA linear HUM 05-APR-2005
DEFINITION Homo sapiens heat shock 70kD protein 12B, mRNA (cDNA clone
IMAGE:6178335), partial cds.
ACCESSION BC090857
VERSION BC090857.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3031)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3031)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: a Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317302.
FEATURES Location/Qualifiers
source 1..3031
/db_xref="H-InvDB:HIT000334241"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6178335"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3031
/gene="HSPA12B"
/gene_synonym="dJ1009E24.2"
/gene_synonym="FLJ32150"
/db_xref="GeneID:116835"
CDS <1..2064
/gene="HSPA12B"
/gene_synonym="dJ1009E24.2"
/gene_synonym="FLJ32150"
/codon_start=1
/product="HSPA12B protein"
/protein_id="AAH90857.1"
/db_xref="GeneID:116835"
/translation="GRRSGHGQRAAGPGSRRLDGAGAVGRAELQGLQGCWLSRRWACR
GCTSKPEVRAPQQASFSVVVAIDFGTTSSGYAFSFASDPEAIHMMRKWEGGDPGVAHQ
KTPTCLLLTPEGAFHSFGYTARDYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQL
EAVNGKTMPALEVFAHALRFFREHALQELREQSPSLPEKDTVRWVLTVPAIWKQPAKQ
FMREAAYLAGLVSRENAEQLLIALEPEAASVYCRKLRLHQLLDLSGRAPGGGRLGERR
SIDSSFRQAREQLRRSRHSRTFLVESGVGELWAEMQAGDRYVVADCGGGTVDLTVHQL
EQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIATFKRQRPAAWVDLTIAF
EARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNFVKWSSQGMLRMS
CEAMNELFQPTVSGIIQHIEALLARPEVQGVKLLFLVGGFAESAVLQHAVQAALGARG
LRVVVPHDVGLTILKGAVLFGQAPGVVRVRRSPLTYGVGVLNRFVPGRHPPEKLLVRD
GRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFITDPG
VRKCGALSLELEPADCGQDTAGAPPGRREIRAAMQFGDTEIKVTAVDVSTNRSVRASI
DFLSN"
BASE COUNT 589 a 912 c 1014 g 516 t
ORIGIN
1 ggccgccgca gcgggcacgg ccaacgagct gcgggcccgg gatcgcggcg gctggacggg
61 gctggagctg tcgggagggc ggagctacag ggcctgcaag gatgttggct gtcccggaga
121 tgggcctgca ggggctgtac atcgaaaccc gaggtccgag ccccccagca ggcctccttc
181 tctgtggtgg tggccattga cttcggcacc acgtctagtg gctatgcttt cagctttgcc
241 agtgaccctg aggccatcca catgatgagg aaatgggagg gcggagaccc gggcgtggcc
301 caccagaaga ccccgacctg cctgctgctg actccggagg gcgccttcca cagctttggc
361 tacaccgccc gcgattacta ccatgacctg gaccccgaag aggcgcggga ctggctctac
421 ttcgagaagt tcaagatgaa gatccacagc gccacggatc tcaccttgaa gacccagcta
481 gaggcagtaa atggaaagac gatgcccgcc ctggaggtgt tcgcccatgc cctgcgcttc
541 ttcagggagc acgcccttca ggagctgagg gagcagagcc catcgctgcc agagaaggac
601 actgtgcgct gggtgttgac ggtgcctgcc atctggaaac agccagccaa gcagttcatg
661 cgggaggctg cctacctggc tggactagtg tcccgagaga atgcagagca gctactcatc
721 gccctggagc ccgaggccgc ctcggtatac tgccgcaagc tgcgcctgca ccagctcctg
781 gacctgagtg gccgggcccc aggtggtggg cgcctgggtg agcgccgctc catcgactcc
841 agcttccgtc aggctcggga gcagctgcga aggtcccgcc acagccgcac gttcctggtg
901 gagtcaggcg taggagagct gtgggcagag atgcaagcag gagaccgcta cgtggtggcc
961 gactgcggcg gaggcaccgt ggacctgacg gtgcaccagc tggagcagcc ccatggcacc
1021 ctcaaggagc tctacaaggc atctgggggc ccttatggcg cggtgggcgt ggacctggcc
1081 ttcgagcagc tgctgtgccg catcttcggc gaggacttca tcgccacctt caaaaggcaa
1141 cggccggcag cctgggtaga tctgaccatc gccttcgagg ctcgcaagcg cactgctggc
1201 ccacaccgtg caggggcgct caacatctcg ctgcccttct ccttcattga cttctaccgc
1261 aagcagcggg gccacaacgt ggagaccgct ctgcgcagga gcagcgtgaa cttcgtgaag
1321 tggtcctcac aggggatgct ccgaatgtct tgtgaagcca tgaacgagct ctttcagccc
1381 accgtcagcg ggatcatcca gcacatagag gccctgctgg cacggccgga ggtgcagggt
1441 gtgaagctgc tgttcctagt gggcggcttc gccgagtcag cggtgctgca gcacgcggtg
1501 caggcggcgc tgggcgcccg cggtctgcgt gtcgtggtcc cgcacgacgt gggcctcacc
1561 atcctcaaag gcgcggtgct gttcggccag gcgccgggcg tggtgcgggt ccgccgctcg
1621 ccgctcacct atggcgtggg cgtgctcaac cgctttgtgc ctgggcgcca cccgcccgaa
1681 aagctgctgg ttcgcgacgg ccgccgctgg tgcaccgacg tcttcgagcg cttcgtggcc
1741 gccgagcagt cggtggccct gggcgaggag gtgcggcgca gctactgccc ggcgcgtccc
1801 ggccagcggc gcgtactcat caacctgtac tgctgcgcgg cagaggatgc gcgcttcatc
1861 accgaccccg gcgtgcgcaa atgcggcgcg ctcagcctcg agcttgagcc cgccgactgc
1921 ggccaggaca ccgccggcgc gcctcccggc cgccgcgaga tccgcgccgc catgcagttt
1981 ggcgacaccg aaattaaggt caccgccgtc gacgtcagca ccaatcgctc cgtgcgcgcg
2041 tccatcgact ttctttccaa ctgagggcgc gccggcgcgg tgccagcgcc gtctgcccgg
2101 ccccgccctc tttcggttca ggggcctgcg gagcgggttg gggcggggga aacgatagtt
2161 ctgcagtctg cgcctttcca cgccctccag ccccggggga gataaggtca tgggagagtg
2221 ggtggggaca cacccagaga ctggctttgg gattgggcac tggtccgctg actgccaggc
2281 tgaagggacc cgccaaggac tgaacgggta agagaagagg tttgcaagac agagcgcgca
2341 gcccggcaag gggcatgtga ccccgaagga agaacgcaac agaagagtcc tggtctgaac
2401 ttggccgagt aggggtgggg gtgggatggc aggaggagcc gcaggaggaa ggaggttgtg
2461 cagggtctgg acctgcaggg ctgaagttca ctcatcgacc gactcagccc caaccgggag
2521 ccaggcagaa aaaccctgtg ccgtaggaaa gtgactggaa gtggactcca gagggacagg
2581 tgtggtggca cagtcctggt gtggtgctga ccacccaaat atgactgtga attgtggaaa
2641 gggcagtaga tctctaatgt ggaggtggga acattattgt ggtggaggca attatgaggg
2701 tagcatttct ttcgagacaa aacacccgtc tgggaaggcc ccaaggtcag cttatgaagg
2761 accccacttg caccccaccc cagccatgga agagcagctg gagggtggat ggggaggcca
2821 gagggagcaa tgaggggtgg tcccagctct gctattgact cggtatgcct ttaggacatt
2881 ctcttaccgc tcatgggcct cagtttccta aagtgtgaaa tgtcaggcac ttccctctaa
2941 ctggcatgca acagccccac ctgcctgaga gccctgaggt gacaataaaa catttatgct
3001 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//