LOCUS BC090057 1814 bp mRNA linear HUM 29-JUL-2008 DEFINITION Homo sapiens chromosome 11 open reading frame 83, mRNA (cDNA clone MGC:87549 IMAGE:30347387), complete cds. ACCESSION BC090057 VERSION BC090057.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1814) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1814) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 168 Row: p Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..1814 /db_xref="H-InvDB:HIT000266314" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87549 IMAGE:30347387" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1814 /gene="C11orf83" /gene_synonym="CCDS41658.1" /gene_synonym="UNQ655" /db_xref="GeneID:790955" /db_xref="HGNC:HGNC:34399" CDS 61..342 /gene="C11orf83" /gene_synonym="CCDS41658.1" /gene_synonym="UNQ655" /codon_start=1 /product="C11orf83 protein" /protein_id="AAH90057.1" /db_xref="GeneID:790955" /db_xref="HGNC:HGNC:34399" /translation="MDSLRKMLISVAMLGAGAGVGYALLVIVTPGERRKQEMLKEMPL QDPRSREEAARTQQLLLATLQEAATTQENVAWRKNWMVGGEGGASGRSP" BASE COUNT 399 a 487 c 523 g 405 t ORIGIN 1 ggcaacagct tgcggctgcg gggagctccc gtgggcgctc cgctggctgt gcaggcggcc 61 atggattcct tgcggaaaat gctgatctca gtcgcaatgc tgggcgcagg ggctggcgtg 121 ggctacgcgc tcctcgttat cgtgaccccg ggagagcggc ggaagcagga aatgctaaag 181 gagatgccac tgcaggaccc aaggagcagg gaggaggcgg ccaggaccca gcagctattg 241 ctggccactc tgcaggaggc agcgaccacg caggagaacg tggcctggag gaagaactgg 301 atggttggcg gcgaaggcgg cgccagcggg aggtcaccgt gagaccggac ttgcctccgt 361 gggcgccgga ccttggcttg ggcgcaggaa tccgaggcag cctttctcct tcgtgggccc 421 agcggagagt ccggaccgag ataccatgcc aggactctcc ggggtcctgt gagctgccgt 481 cgggtgagca cgtttccccc aaaccctgga ctgactgctt taaggtccgc aaggcgggcc 541 agggccgaga cgcgagtcgg atgtggtgaa ctgaaagaac caataaaatc atgttcctcc 601 acccagaatg agccctgcag tcgacaccta ccaatgctta gagacgcgtg gtcggtgctg 661 ggggcgcggc ctggagctgc tgcctgtccc accccaccag aagaggctga tcccgatagg 721 tatctgacca catttttttt tttttttttt tttgagacgg agtcaatgtc acccaggctg 781 gagtgcagtg gcacgatctc ggctcactgc aacctccgcc cctgggttcc agcaattctc 841 ctgcctcagc ttcccgagta gccgggatca caagtgcgcg ccaccaagcc cagctaactt 901 ttgtgttttt agtagagaca gggttcacca tgttggctag actggtctcg aactccagac 961 ccaggtgatc cgcccgcctc ggcctcccaa agggctggga ttacaggcgt gaaccacctc 1021 gccctgccgc ggccacattt tttctttttt ttgagatgga gtcttgctct tgtcacccag 1081 gcaggagtgc agtggcgcaa tcttggctca ctgcaacctc tgcctcctgg gttcaagctg 1141 ttctccttac tcagcctccc atgtagctgg gattacaggc gtccgcaacc acgcccggct 1201 gatattagta gttttagtag aggcgggttt caccatgtgg ccaggctgat ctcgaactcc 1261 tgacctcagg cagttcaccc gtctcagcct cccaaagtgc tgggattaga ggcgtgagcc 1321 actgcgcccg gccaaccaca ttttcaaaac aggtcatgtg gtgtcaggtt ggagtgtact 1381 tccagggata accgtgggac attcttgaaa tctgaactat cctgggaagt cttgaagtaa 1441 tggatgccta tagtggacac tcaggactcc tgtccttgga gcgagattgg aggggcatct 1501 agcacttaac atatgccaca atgctttctg tggccattat ttaacctctg gttaaacaag 1561 cttaggaggc tgacttacta gtagtaaaag gagtgtgctt tgagtcacag atcctggttg 1621 aactccagca tgttacaaac ctcagccctg ttctatgaaa ggtcataact acgaggatta 1681 ttgtaaaaca ttaatttaga aatgtaaagt ggtccccaat ctctggatct ggtcaggatt 1741 tattggagct gccactgagg ggattaaata agtggggtca aagccccaca gcctagtcaa 1801 aaaaaaaaaa aaaa //