LOCUS BC089444 1990 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens Rab interacting lysosomal protein-like 1, mRNA (cDNA
clone MGC:105128 IMAGE:30559974), complete cds.
ACCESSION BC089444
VERSION BC089444.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mary Hendrix
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 201 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31342079.
FEATURES Location/Qualifiers
source 1..1990
/db_xref="H-InvDB:HIT000266287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:105128 IMAGE:30559974"
/tissue_type="Chondrosarcoma Lung Metastasis"
/clone_lib="NIH_MGC_215"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
gene 1..1990
/gene="RILPL1"
/db_xref="GeneID:353116"
/db_xref="HGNC:HGNC:26814"
CDS 39..1250
/gene="RILPL1"
/codon_start=1
/product="RILPL1 protein"
/protein_id="AAH89444.1"
/db_xref="GeneID:353116"
/db_xref="HGNC:HGNC:26814"
/translation="MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQ
HGCEAIARLMPKVVRVLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQ
KELELVEDVWRGEAQDLLSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERER
QVMKKLKEVVDKQRDEIRAKDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQ
GKALIEQKVELEADLQTKEQEMGSLRAELGKLRERLQGEHSQNGEEEPETEPVGEESI
SDAEKVAMDLKDPNRPRFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRI
PQPPPIAHPRTSPQPESGIKRLFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGY
TEQGQEALQHL"
BASE COUNT 532 a 505 c 602 g 351 t
ORIGIN
1 cgagtttgcg gggcggggga caggccagga gggtggccat ggaggaggag cgggggtcgg
61 cgctggcggc cgagtcggcg ctggagaaga acgtggccga gctgaccgtc atggacgtgt
121 acgacatcgc gtcgcttgtg ggccacgagt tcgagcgggt cattgaccag cacggctgcg
181 aggccatcgc gcgcctcatg cccaaggtcg tgcgcgtcct ggagatcctg gaggtgctgg
241 tcagccgcca ccacgtcgcg cccgagctgg acgagctgcg cctggagctg gaccgcctgc
301 gcctggagag gatggaccgc atcgagaagg agcgcaagca ccagaaggag ctggagctgg
361 tggaggatgt gtggcgaggg gaggcgcagg acctcctctc ccagatcgcc cagctgcagg
421 aggagaacaa gcagctcatg accaacctct cccacaagga tgtcaacttc tcagaggagg
481 agttccagaa gcatgaaggc atgtcagagc gggagcgaca ggtgatgaag aagctgaagg
541 aggtggtgga caaacaacgc gacgagatcc gcgccaagga cagggagctg ggcctgaaaa
601 atgaggacgt tgaggcttta cagcagcagc agacacggct gatgaagatc aaccatgacc
661 ttcggcaccg ggtcacggtg gtggaggccc aggggaaagc cctgatcgaa cagaaggtgg
721 agctggaggc agacctgcag accaaggagc aggagatggg cagcctgcga gcagagctgg
781 ggaagttgcg agagaggctg cagggggagc acagccagaa tggggaggag gagcctgaga
841 cggagccggt gggagaggag agcatctccg acgcagagaa ggtggccatg gatctcaagg
901 accccaaccg cccccggttc accctgcagg agctgcggga cgtgctgcac gagaggaacg
961 agctcaagtc caaggtgttc ttgctgcagg aggagctggc ttactataag agtgaagaaa
1021 tggaagagga aaaccgaata ccccaacccc cacccatcgc ccacccgagg acgtcccccc
1081 agccggagtc gggcatcaag cgactgttta gcttcttctc ccgagataag aagcgcctgg
1141 ccaacacaca gagaaacgtg cacatccagg agtcctttgg acagtgggca aacacccacc
1201 gcgatgacgg ttacacagag caaggacagg aagccctgca gcatctgtga ccttggccca
1261 tctccaccct ccaacctgga ctgcccgcca ccagcgcctg caaccgaact gcagcccagg
1321 ggtcattgct gcctcaagcc tctcggtgca gatgcaccct gaaaactgac ccctcaaaca
1381 gactgtctga tttgaggatg gacattgaaa aactgacgcc aaactctaaa gaaatgttta
1441 tttataccca gggctatcac tgtttctaat agatgactct gatcccgtag gatatatatt
1501 taataatccc acaaacggag gccagacttc tgcgttaact tcagtaacac aagcttcttt
1561 aagccaaata catcacttgc cactatcatt gctgtttgac ttgctttgta taaaatgcta
1621 tgtgtagagg ttttattatc acaggtgaca tagttcagca ggaggcatgg aagggctaga
1681 tcttcattag ttacattcat gaaattgtga tggtaacgta ttatacagaa tgtatccatc
1741 aggcagacaa ggggtctgaa gtcacaggct cagtagccca actcagacac aaagccacag
1801 acaatatgga tgatggtcct cttacccaga aactggagac aactttgcag gcaccctggc
1861 tgcgttcctg ataatgccta gagcatgtag caatgttcaa ggcaggtgcc ttggaatctg
1921 ctgtgagtta tgcagtacta accaaacaaa gttgctaagg atgagatgtt gcaaaaaaaa
1981 aaaaaaaaaa
//