LOCUS BC089442 2483 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens forkhead box F1, mRNA (cDNA clone MGC:105125
IMAGE:30558276), complete cds.
ACCESSION BC089442
VERSION BC089442.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2483)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2483)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mary Hendrix
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 201 Row: a Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503732.
FEATURES Location/Qualifiers
source 1..2483
/db_xref="H-InvDB:HIT000266285"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:105125 IMAGE:30558276"
/tissue_type="Chondrosarcoma Lung Metastasis"
/clone_lib="NIH_MGC_212"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
gene 1..2483
/gene="FOXF1"
/gene_synonym="FREAC1"
/db_xref="GeneID:2294"
/db_xref="HGNC:HGNC:3809"
/db_xref="MIM:601089"
CDS 108..1172
/gene="FOXF1"
/gene_synonym="FREAC1"
/codon_start=1
/product="forkhead box F1"
/protein_id="AAH89442.1"
/db_xref="GeneID:2294"
/db_xref="HGNC:HGNC:3809"
/db_xref="MIM:601089"
/translation="MDPASSGPSKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRL
TLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPA
SEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHLPDTYGFQGSAGGLSCPPNS
LALEGGLGMMNGHLPGNVDGMALPSHSVPHLPSNGGHSYMGGCGGAAAGEYPHHDSSV
PASPLLPTGAGGVMEPHAVYSGSAAAWPPSASAALNSGASYIKQQPLSPCNPAANPLS
GSLSTHSLEQPYLHQNSHNAPAELQGIPRYHSQSPSMCDRKEFVFSFNAMASSSMHSA
GGGSYYHQQVTYQDIKPCVM"
BASE COUNT 522 a 757 c 638 g 566 t
ORIGIN
1 gcggcagcgg cggcggcggc agcagccacc cgatgtcttc ggcgcccgag aagcagcagc
61 caccgcacgg cggcggcggc ggcggcggcg ggggaggcgg cgcggccatg gaccccgcgt
121 cgtccggccc gtccaaggcc aagaagacca acgccggcat ccggcgcccg gagaagccgc
181 cctattccta catcgcgctc atcgtcatgg ccatccagag ttcacccacc aagcgcctga
241 cgctgagcga gatctaccag ttcctgcaga gccgcttccc cttcttccgg ggctcctacc
301 agggctggaa gaactccgtg cgccacaacc tctcgctcaa cgagtgcttc atcaagctac
361 ccaagggcct tgggcggccc ggcaagggcc actactggac catcgacccg gccagcgagt
421 tcatgttcga ggagggctcc tttcggcggc ggccgcgcgg cttccgaagg aaatgccagg
481 cgctcaagcc catgtacagc atgatgaacg ggctcggctt caaccacctc ccggacacct
541 acggcttcca gggctcggcc ggcggcctct cgtgcccgcc caacagcctg gcgctggagg
601 gcggcctggg catgatgaac ggccacttgc cgggcaacgt ggacggcatg gccctgccca
661 gccactcggt gccccacctg ccttccaacg gcggccactc gtacatgggc ggctgcggcg
721 gcgcggcggc cggcgagtac ccgcaccacg acagctcggt gcccgcctcc ccgctgctgc
781 ccaccggcgc cggtggggtc atggagccgc acgccgtcta ctcgggctcg gcggcggcct
841 ggccgccctc ggcgtccgcg gcgctcaaca gcggcgcctc ttatatcaag cagcagcccc
901 tgtccccctg taaccccgcg gccaaccccc tgtccggcag cctctccacg cactccctgg
961 agcagccgta tctgcaccag aacagccaca acgccccagc cgagctgcaa ggcatcccgc
1021 ggtatcactc gcagtcgccc agcatgtgtg accgaaagga gtttgtcttc tctttcaacg
1081 ccatggcgtc ctcttccatg cactcggccg gcgggggctc ctactaccac cagcaggtca
1141 cctaccaaga catcaagcct tgcgtgatgt gaggctgccg ccgcaggccc tcctggtgca
1201 ggcaggcggg tcacagggac cctggaccgg cacaagaaac tgctttcttc tcgaggtata
1261 accgtcggca gaagaaaagg gttccacctc tccccaaccg gagtttttgg caaggagtcc
1321 ccaatgcaaa gacacagcgc tgcggttggc acctccttcc tcactccttc aaaattgtta
1381 agaaatgtta gtggtgggtc tgatctgact gcagccatcg gtaaataaaa gtttttgatc
1441 ctgttgaacc cgcctgagac ggtgctgtgc aggggaaagc ccccgcaccc acacaggaat
1501 tctgctgagg tcccccctcc ttccggccaa tggcagaagt gggggaaaat ttttagaaga
1561 aaagcaaaca tgtgagacca atcattatca aatactttta ttttttggtt gagtatttat
1621 ctttttattt tttatttttt ttttgaaaga atgtcttgga atgcgcaagt ctccctttag
1681 agccgtcttt tgcagggagc gggaagtgac aagagctcag atctccctcc cgatctccct
1741 ccccacctcc gaagtctcct ccgtggacca caggtggatc tttgtgcgaa caacttgcat
1801 ttcggaagcc actgtccgtc tttaaacaga aagtcaaagg agccacgaag caagcggccg
1861 tccgggcgtc cgcctccgtc cccttccatg ttcctcctct tccttcgctt cagcctcttc
1921 tgttatgttt tgtcttgaat tttatttaga ctttttcagt gggtattttt ctgtctccca
1981 acctctactg taaactttct ggtccgagaa cgagccgaac acagcgcgac gcagggacta
2041 ggacggcccg gtgaccgcgc ggattcagga ttgcggggac gcagaaaggt taaggcactt
2101 ttaaaaacta tagcaaggct cctgtttatt tattctactt tctttcccta ataatcaaaa
2161 caccgcgtag gctcctccgt ttatcagtat taatggtgta actttgttgg caatatttgc
2221 cgtgtagaat tttttttaga tatccattgt aaatttgaaa caaagaccga tctgtgtaaa
2281 aacaaatttc catatgtttt atataaatat atatataata tgaaggacta ccctcctttt
2341 tttttttttg tattttggct gctagagtgc agcatttgtg acacgtattt gaaatttgaa
2401 atttccttct gcactgtata aaaggaccat ttgaggatgt tttgcctttt gtgtattttt
2461 tcctaaaaaa aaaaaaaaaa aaa
//