LOCUS BC089433 1016 bp mRNA linear HUM 15-FEB-2005 DEFINITION Homo sapiens PDZ domain containing 11, mRNA (cDNA clone IMAGE:30559280), partial cds. ACCESSION BC089433 VERSION BC089433.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1016) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1016) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mary Hendrix cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 201 Row: a Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254875. FEATURES Location/Qualifiers source 1..1016 /db_xref="H-InvDB:HIT000266276" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:30559280" /tissue_type="Chondrosarcoma Lung Metastasis" /clone_lib="NIH_MGC_214" /lab_host="DH10B" /note="Vector: pYX-ASC" gene <1..1016 /gene="PDZK11" /db_xref="GeneID:51248" CDS <1..422 /gene="PDZK11" /codon_start=3 /product="PDZK11 protein" /protein_id="AAH89433.1" /db_xref="GeneID:51248" /translation="DSRIPYDDYPVVFLPAYENPPAWIPPHERVHHPDYNNELTQFLP RTITLKKPPGAQLGFNIRGGKASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQ DIEHSKAVEILKTAREISMRVRFFPYNYHRQKERTVH" BASE COUNT 355 a 229 c 195 g 237 t ORIGIN 1 tggacagccg gattccttat gatgactacc cggtggtttt cttgcctgcc tatgagaatc 61 ctccagcatg gattcctcct catgagaggg tacaccaccc ggactacaac aatgagttga 121 cccagtttct gccccgaacc atcacactga agaagcctcc tggagctcag ttgggattta 181 acatccgagg aggaaaggcc tcccagctag gcatcttcat ctccaaggtg attcctgact 241 ctgatgcaca tagagcagga ctgcaggaag gggaccaagt tctagctgtg aatgatgtgg 301 atttccaaga tattgagcac agcaaggctg ttgagatcct gaagacagct cgtgaaatca 361 gcatgcgtgt gcgcttcttt ccctacaatt atcatcgcca aaaagagagg actgtgcact 421 agaaagttgc agcccacagc ccttcatgtg gactctgtca tgacatgcta actagacttc 481 aggggagcca cttctgtttt cagcccctcc ctggaatagt gagttgggag gatggggaga 541 cagctaacca actgcattac ccaaaccata ttgcactttt agttccctag ttttctaggt 601 gagcttcatt ccctgaaagg aggatgatga tatctaggca taacctagcc tgtgaggaac 661 ctagttagga aagacaactg acatttattg aatatcatgc actagtccct tacatatgtc 721 atattttaat tatagaaatc agtagcaaaa agaatcttgg ggattttcca tctgacttcc 781 ctggccatct tatcccatcc ttgcactacc agaagattca tacacttttg agactccagt 841 gagacgctgt tttcacccct tcctcctcct agcctctctc ccaaaaagta aaacacaatg 901 ctgaagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //