LOCUS BC089424 1616 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens zinc finger protein 789, mRNA (cDNA clone MGC:105017
IMAGE:3054018), complete cds.
ACCESSION BC089424
VERSION BC089424.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1616)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1616)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 199 Row: a Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676101.
FEATURES Location/Qualifiers
source 1..1616
/db_xref="H-InvDB:HIT000266267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:105017 IMAGE:3054018"
/tissue_type="Lymph, normal germinal center B cells"
/clone_lib="NIH_MGC_36"
/lab_host="DH10B"
/note="Vector: pT7T3-Pac"
gene 1..1616
/gene="ZNF789"
/db_xref="GeneID:285989"
/db_xref="HGNC:HGNC:27801"
CDS 182..1459
/gene="ZNF789"
/codon_start=1
/product="zinc finger protein 789"
/protein_id="AAH89424.2"
/db_xref="GeneID:285989"
/db_xref="HGNC:HGNC:27801"
/translation="MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENY
RNMVLLGFQFPKPEMICQLENWDEQWILDLPRAGNRKASGSACPGSEARHKMKKLTPK
QKFSEDLESYKISVVMQESAEKLSEKLHKCKEFVDSCRLTFPTSGDEYSRGFLQNLNL
IQDQNAQTRWKQGRYDEDGKPFNQRSLLLGHERILTRAKSYECSECGKVIRRKAWFDQ
HQRIHFLENPFECKVCGQAFRQRSALTVHKQCHLQNKPYRCHDCGKCFRQLAYLVEHK
RIHTKEKPYKCSKCEKTFSQNSTLIRHQVIHSGEKRHKCLECGKAFGRHSTLLCHQQI
HSKPNTHKCSECGQSFGRNVDLIQHQRIHTKEEFFQCGECGKTFSFKRNLFRHQVIHT
GSQPYQCVICGKSFKWHTSFIKHQGTHKGQIST"
BASE COUNT 531 a 325 c 393 g 367 t
ORIGIN
1 cctccggtaa ggggtgattc gccgaggggc gcggaccaga cagacctcgg gtcaggcccg
61 ggaaccccga gaggagagcc cagcccctgg tggaggcggc ttggcggaga ttcggagccg
121 tcagcagctc agccagacgt ccaggatccc accccttgca aaagaccagg ccgtggaagc
181 catgttccca ccagccaggg ggaaggagct gctctcgttt gaggatgtgg cgatgtactt
241 caccagagag gagtggggcc acctcaactg gggtcagaag gacctctacc gagatgtgat
301 gttggagaac tacaggaaca tggtcttgct gggatttcag tttcccaaac ctgagatgat
361 ctgtcagctg gagaactggg acgagcagtg gatcctggat ctaccgagag ctgggaatag
421 gaaggcttcc ggtagtgctt gcccaggttc tgaagccaga cacaagatga aaaagctaac
481 tccaaaacag aaattttctg aagatttaga gtcatataag atatcagtgg taatgcagga
541 atcagctgag aaactttcag aaaagttaca taagtgtaaa gaatttgtgg acagttgcag
601 gcttactttc cctactagtg gtgatgaata cagcaggggc ttccttcaaa accttaacct
661 tattcaagat cagaatgcgc aaacaaggtg gaagcagggc agatatgatg aggatggcaa
721 acccttcaat caaagatctt tgcttttggg gcatgagcga attctcacaa gagcaaagtc
781 ttatgaatgc agtgaatgtg gaaaagtcat taggcgtaag gcatggtttg atcaacatca
841 aagaattcac tttttagaga atccttttga gtgtaaggtc tgtgggcaag ccttcagaca
901 gcggtcagct cttacggtcc ataaacagtg tcacctgcaa aacaagccat acagatgtca
961 tgactgtgga aagtgttttc ggcagctcgc gtatcttgtt gaacataaga ggattcacac
1021 caaagaaaaa ccttataaat gtagcaaatg tgaaaaaacg tttagtcaga attcaaccct
1081 tattcgacat caggtgatcc atagtggaga aaaacgccat aaatgccttg agtgtggaaa
1141 agcctttggc cggcattcaa cccttctatg tcatcaacag attcacagta aaccgaacac
1201 ccataaatgc agtgaatgtg gacagtcctt tggtaggaat gtggatctca ttcagcatca
1261 aagaatccat acaaaggagg aattctttca atgtggagaa tgtgggaaaa cgtttagttt
1321 taagaggaat ctttttcgac atcaggtcat tcacactgga agccaaccct accaatgtgt
1381 catatgtgga aaatctttca agtggcacac aagctttatt aagcaccagg gcactcacaa
1441 aggacagata tccacatgat gttaattgga aagcagtcat tggagaacta gaacttataa
1501 acctctactt caagtgtgta tcacgtaatt gtttccatga aaagcaataa atgtaacaaa
1561 gggttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//