LOCUS BC089387 2718 bp mRNA linear HUM 22-FEB-2005
DEFINITION Homo sapiens tudor domain containing 5, mRNA (cDNA clone
IMAGE:30387175), partial cds.
ACCESSION BC089387
VERSION BC089387.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2718)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (01-FEB-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734938.
FEATURES Location/Qualifiers
source 1..2718
/db_xref="H-InvDB:HIT000266230"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30387175"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene <1..2718
/gene="TDRD5"
/gene_synonym="FLJ34823"
/db_xref="GeneID:163589"
CDS <1..2366
/gene="TDRD5"
/gene_synonym="FLJ34823"
/codon_start=3
/product="TDRD5 protein"
/protein_id="AAH89387.1"
/db_xref="GeneID:163589"
/translation="SLLMLKKSVTEEKPRGCPAGKIFTQPFRMKQGSYSTGFPVAKPC
FSQPTSNMEPPKQIMSMEKTSKLNVVETSRLNHTEKLNQLENTFKSVIAQIGPGGTIS
SELKHKIKFVVSKFPEGLFISKLLGEYEVIFKEQLSPKKLGFLNVTELVGALSDILHV
EFRKGHQDLLVFDADKKPLPPVQSDKKIEAKACVSSPPRNSLSTAAVKETVWNCPSKK
QKEPQQKICKKPNLVVKPLQLQVETNKSELNLAMANHDIPPDAVPNKKLCRLPPLDTS
SLIGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYVMPECFIQP
GHLCCVRISEDKWWYRVIIHRVLEKQEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPA
QAIPCSLAWVRPVEEHWTSKAILQFQKLCGLKPLVGVVDEYVDGILNIFLCDTSSNED
VYFHHVLRTEGHAIVCRENISSKGFSELNPLALYTTSSGGPEDIVLTELGYPSQQHYF
NEDRKISPQSKESELRILDKIPTGMPCLESVTIGDDIWDENWLPLQAKMGKGGDAASH
LFTASLGGKNQYSSCKEMPQKDWCFSTPKDTWDDSWQPSGLVNGTKVEVHKPEVLGAQ
EKNTGTNRTQKQLDINGSSDSSTLPKLEEFCTSLTQSEQSADGSQSEPNNSQTQPKQI
QLSTAAPCSTTAVDDSAEKPSGSVESSPEILKNEDFSSSRAITLYKDKRQESVDQLSL
ILSYECQISQKLYIPRSTATAALGAAARLATSRSLLHWYPSVKRMEA"
BASE COUNT 843 a 536 c 592 g 747 t
ORIGIN
1 gttctttgtt gatgctaaag aagagtgtaa cagaggaaaa gccgagagga tgtccagcag
61 gtaaaatttt tacccagcca tttagaatga aacaagggtc atactccaca ggctttccgg
121 tagcaaagcc atgcttttca caacccactt caaacatgga accaccgaag caaataatga
181 gcatggaaaa gacttccaag ttaaatgtag tggagacttc aagactgaat cacactgaaa
241 aattaaacca gctggagaac acattcaaat cagttattgc acagattgga cctggaggaa
301 ctatcagttc agaactaaaa cataagataa aatttgttgt atctaagttc ccagagggtt
361 tgtttatttc taaactgctt ggagagtatg aggtaatttt taaagagcaa ctatcaccaa
421 aaaaattagg cttcttaaat gtgacagaac ttgttggagc tcttagtgac attctccatg
481 ttgagttcag gaaaggacac caagacttac tagtgtttga tgcggataag aagcctctac
541 cacctgttca gtcagataag aaaatagaag ccaaagcttg tgtctccagt ccacctagaa
601 attcattgtc tactgctgct gtcaaagaga ctgtatggaa ttgcccttca aaaaaacaaa
661 aagagccaca acagaagatt tgcaagaagc ctaatctggt ggtaaagcct ttacagctgc
721 aagtagaaac aaacaaatca gagctcaact tggcaatggc aaatcatgac atcccgccag
781 acgctgtgcc gaacaagaaa ttatgcagac tcccaccatt agacaccagt tccctcatag
841 gggtctttgt ggagtatatc atctctccta gtcaattcta catccggatc tatagcaggg
901 attcgtcaga gttactcgaa gacatgatga ttgaaatgcg gcgctgttat tctaatcagc
961 tggtttctga tcgatatgtc atgccagaat gttttattca gccgggacat ctctgttgtg
1021 taaggatttc tgaggataag tggtggtatc gggtcattat ccatcgagtc cttgagaaac
1081 aggaagttga agtgttctac ccagactttg gaaatattgg aattgttcag aagtcctccc
1141 tgaggttcct caagtgctgc tacacaaagc ttccagctca ggctatccct tgttctttgg
1201 cttgggtgag accagtagag gaacactgga catcgaaagc tattttgcag ttccagaagt
1261 tgtgcggttt gaagccatta gtgggggtag tggatgaata tgtagatgga atccttaaca
1321 tttttttgtg tgacacatcc tcaaacgaag atgtctattt ccatcatgtc ttgagaacag
1381 agggccatgc tattgtatgc cgagaaaata tctcttctaa gggtttcagt gagctcaacc
1441 ctttagcttt atacacgaca tccagtggag ggccagagga cattgtcttg acagaactgg
1501 gttatccttc ccagcagcac tattttaatg aagaccgaaa gataagtcca cagtcaaaag
1561 agagtgagtt acgtatcttg gataagatcc ccactggaat gccatgcctg gagtcagtga
1621 ccataggtga tgatatttgg gatgagaact ggttacctct acaggctaaa atgggaaaag
1681 gaggtgatgc tgcctcccat ctatttactg caagccttgg tggaaagaat cagtattcat
1741 catgtaaaga aatgccacag aaggactggt gtttttctac ccctaaagat acatgggatg
1801 attcttggca gccttcaggc cttgtaaatg gaacgaaagt agaagttcat aagccagaag
1861 tactgggtgc tcaggaaaaa aatactggca caaacaggac tcaaaagcaa ctagacataa
1921 atggttcttc agattcttcc acactgccca aattggaaga attctgtacc tctcttaccc
1981 agtcagagca gtcagcagac gggagccagt ctgaacccaa caacagtcag actcagccaa
2041 agcaaattca gctttccaca gcagcaccct gttcaacaac tgcagtggat gattccgcag
2101 aaaagccctc tggttctgtg gaaagctcac cagagatcct aaagaatgaa gatttttcta
2161 gcagccgtgc tattacattg tacaaagaca agcgtcaaga atctgtagac cagctgtctt
2221 tgattttgtc ttatgagtgc cagatttctc agaagctcta cattcctcga agtacagcca
2281 ctgctgcctt aggtgctgcc gcacggttag ctacatccag gagcctccta cactggtacc
2341 ccagtgtgaa aaggatggaa gcatgaggga gggagggagg agggagaaaa acagaatcca
2401 gccgcttagg ctttgatgaa ctcccaggcc aaaatgagga gttattgaag caaaatagta
2461 tcttgatcat tgatactttt gtctttctgt gactatatgt tagctttatt atgctaacag
2521 tctactttga tgtgtaagta agtattgata tttactgtta atcttgattt ttcttgattt
2581 tattctgtgt cattttgttc acctttgttt ttaatgtagt ttaaaggaat ttgttttttt
2641 gtgtttgttt ttcttgtaca ttatcatgac tgataaatga aaattgaaaa actaaaaaaa
2701 aaaaaaaaaa aaaaaaaa
//