LOCUS BC088373 1305 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein L3, mRNA (cDNA clone MGC:111436
IMAGE:6195715), complete cds.
ACCESSION BC088373
VERSION BC088373.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16507968.
FEATURES Location/Qualifiers
source 1..1305
/db_xref="H-InvDB:HIT000266207"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111436 IMAGE:6195715"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1305
/gene="RPL3"
/gene_synonym="TARBP-B"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
CDS 24..1235
/gene="RPL3"
/gene_synonym="TARBP-B"
/codon_start=1
/product="ribosomal protein L3"
/protein_id="AAH88373.1"
/db_xref="GeneID:6122"
/db_xref="HGNC:HGNC:10332"
/db_xref="MIM:604163"
/translation="MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLT
AFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTF
KTVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVI
RVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMID
VIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQKGYHH
RTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFVMLK
GCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMGPL
KKDRIAKEEGA"
BASE COUNT 349 a 319 c 383 g 254 t
ORIGIN
1 cggacgcgtg ggttgatggc gtgatgtctc acagaaagtt ctccgctccc agacatgggt
61 ccctcggctt cctgcctcgg aagcgcagca gcaggcatcg tgggaaggtg aagagcttcc
121 ctaaggatga cccatccaag ccggtccacc tcacagcctt cctgggatac aaggctggca
181 tgactcacat cgtgcgggaa gtcgacaggc cgggatccaa ggtgaacaag aaggaggtgg
241 tggaggctgt gaccattgta gagacaccac ccatggtggt tgtgggcatt gtgggctacg
301 tggaaacccc tcgaggcctc cggaccttca agactgtctt tgctgagcac atcagtgatg
361 aatgcaagag gcgtttctat aagaattggc ataaatctaa gaagaaggcc tttaccaagt
421 actgcaagaa atggcaggat gaggatggca agaagcagct ggagaaggac ttcagcagca
481 tgaagaagta ctgccaagtc atccgtgtca ttgcccacac ccagatgcgc ctgcttcctc
541 tgcgccagaa gaaggcccac ctgatggaga tccaggtgaa cggaggcact gtggccgaga
601 agctggactg ggcccgcgag aggcttgagc agcaggtacc tgtgaaccaa gtgtttgggc
661 aggatgagat gatcgacgtc atcggggtga ccaagggcaa aggctacaaa ggggtcacca
721 gtcgttggca caccaagaag ctgccccgca agacccaccg aggcctgcgc aaggtggcct
781 gtattggggc atggcatcct gctcgtgtag ccttctctgt ggcacgcgct gggcagaaag
841 gctaccatca ccgcactgag atcaacaaga agatttataa gattggccag ggctacctta
901 tcaaggacgg caagctgatc aagaacaatg cctccactga ctatgaccta tctgacaaga
961 gcatcaaccc tctgggtggc tttgtccact atggtgaagt gaccaatgac tttgtcatgc
1021 tgaaaggctg tgtggtggga accaagaagc gggtgctcac cctccgcaag tccttgctgg
1081 tgcagacgaa gcggcgggct ctggagaaga ttgaccttaa gttcattgac accacctcca
1141 agtttggcca tggccgcttc cagaccatgg aggagaagaa agcattcatg ggaccactga
1201 agaaagaccg aattgcaaag gaagaaggag cttaatgcca ggaacagatt ttgcagttgg
1261 tggggtctca ataaaagtta ttttccactg aaaaaaaaaa aaaaa
//