LOCUS BC088366 1671 bp mRNA linear HUM 27-MAY-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 59, mRNA (cDNA clone
MGC:111091 IMAGE:30390911), complete cds.
ACCESSION BC088366
VERSION BC088366.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1671)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1671)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389358.
FEATURES Location/Qualifiers
source 1..1671
/db_xref="H-InvDB:HIT000266200"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111091 IMAGE:30390911"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1671
/gene="C1orf59"
/gene_synonym="FLJ30525"
/db_xref="GeneID:113802"
CDS 159..1340
/gene="C1orf59"
/gene_synonym="FLJ30525"
/codon_start=1
/product="C1orf59 protein"
/protein_id="AAH88366.1"
/db_xref="GeneID:113802"
/translation="MEENNLQCSSVVDGNFEEVPRETAIQFKPPLYRQRYQFVKNLVD
QHEPKKVADLGCGDTSLLRLLKVNPCIELLVGVDINEDKLRWRGDSLAPFLGDFLKPR
DLNLTITLYHGSVVERDSRLLGFDLITCIELIEHLDSGDLARFPEVVFGYLSPSMIVI
STPNSEFNPLFPSVTLRDSDHKFEWTRMEFQTWALYVANRYDYSVEFTGVGEPPAGAE
NVGYCTQIGIFRKNGGKATESCLSEQHDQHVYKAVFTTSYPSLQQERFFKLVLVNEVS
QQVESLRVSHLPRRKEQAGERGDKPKDIGGSKAPVPCFGPVFTEVEKAKIENSPTPFC
VGDKFFVPLQRLLAYPKLNRLCANEEMMRSVIADSIPLSSDGSAVVADLRNYFDEQFE
F"
BASE COUNT 508 a 296 c 389 g 478 t
ORIGIN
1 ttgttttttc ggttgggcat gctgcttacc gcaggatgat ggaagcgacg gcccgtacaa
61 agacagaagc gttggtttca ctgagtcagt gctgattctc tcaaatagag cttgaaggat
121 aaatcttcat ttttgtttca acaaaacttc gaaacaaaat ggaagaaaat aatctacagt
181 gcagtagtgt ggttgacggt aattttgaag aagttcccag ggagacggca attcagttta
241 aacctccact atacagacag cggtaccagt tcgttaaaaa tttagtggat caacatgagc
301 ctaagaaggt tgcagacctg ggatgtggtg atacttcact cttaaggctg ctaaaagtca
361 atccatgcat tgaattgctt gttggagtag atattaatga ggataaatta cgatggagag
421 gggattcgtt agctcctttc ctgggggatt ttctgaaacc tcgggatctg aatttgacca
481 tcacattgta tcatggctcc gttgtggaga gagactctcg tttgcttgga tttgacttga
541 taacgtgtat tgaattaata gaacatttgg attcaggtga tctggccaga tttcctgaag
601 tggtatttgg gtacctgtct ccatccatga ttgtcatcag cacaccaaac tctgaattca
661 atcccctgtt tccatcagtg accttaagag attcagatca taaatttgag tggaccagaa
721 tggagtttca gacctgggct ttatatgtgg caaatcgcta tgattactct gtggagttta
781 ctggtgtcgg ggaaccacca gctggagctg agaatgttgg atactgtacc cagataggaa
841 tcttccggaa aaatggagga aaggcaacag aatcatgtct ttcagagcag catgatcagc
901 atgtttataa agctgttttt accacctcat acccaagctt acagcaggaa aggttcttta
961 aacttgtgtt ggttaatgag gtgtcccaac aagtggaaag cttaagagtg agccacctgc
1021 caaggcggaa agaacaggct ggggaacggg gtgataagcc caaagacatt ggtggctcaa
1081 aggcccctgt cccatgcttt ggaccagtct tcacagaggt tgagaaggcc aagatagaga
1141 actctcccac acccttctgt gttggagata aatttttcgt acctctgcag agactccttg
1201 cgtatcccaa gttgaaccgc ttatgtgcta atgaagagat gatgagatca gtcattgctg
1261 actcaattcc tctgagcagt gatggttctg cagtggtggc tgacctgcgt aattattttg
1321 atgaacagtt tgagttttga accatgttta tttcctgaaa tttcagggtc tcagcgatag
1381 ttgtgctcac ttagaattta gttttttttg tgtaatccta attcaagtaa tgtttttaaa
1441 gtttcactgc aaaagtctat gttccaagcc attggacaga cctgcttgag atatggccag
1501 actgcagtga gccctgagaa agatatgagg gtttaaaacg ggtgctttcc tttgattttg
1561 gacttttttg ttttctcaag aataaagaag ttggatgtgg taaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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