LOCUS       BC088365                1994 bp    mRNA    linear   HUM 09-JUN-2008
DEFINITION  Homo sapiens ring finger protein, transmembrane 1, mRNA (cDNA clone
            MGC:111090 IMAGE:30390062), complete cds.
ACCESSION   BC088365
VERSION     BC088365.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1994)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1994)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-DEC-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. Michael Brownstein
            cDNA Library Preparation: Invitrogen Corp
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 196 Row: i Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21361528.
FEATURES             Location/Qualifiers
     source          1..1994
                     /db_xref="H-InvDB:HIT000266199"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:111090 IMAGE:30390062"
                     /tissue_type="Testis"
                     /clone_lib="NIH_MGC_180"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6.1"
     gene            1..1994
                     /gene="RNFT1"
                     /gene_synonym="PTD016"
                     /db_xref="GeneID:51136"
                     /db_xref="HGNC:HGNC:30206"
     CDS             57..1364
                     /gene="RNFT1"
                     /gene_synonym="PTD016"
                     /codon_start=1
                     /product="ring finger protein, transmembrane 1"
                     /protein_id="AAH88365.2"
                     /db_xref="GeneID:51136"
                     /db_xref="HGNC:HGNC:30206"
                     /translation="MPLFLLSLPTPPSASGHERRQRPEAKTSGSEKKYLRAMQANRSQ
                     LHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDVHIQINSIPKECAENASSRNIRSG
                     VHSCAHGCVHSRLRGHSHSEARLTDDTAAESGDHGSSSFSEFRYLFKWLQKSLPYILI
                     LSVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERSSKIQCAWLLVFLAGSSVL
                     LYYTFHSQSLYYSLIFLNPTLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLVPSFI
                     MPFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLIL
                     KLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQH
                     IFCEECMTLWFNREKTCPLCRTVISDHINKWKDGATSSHLQIY"
BASE COUNT          607 a          347 c          382 g          658 t
ORIGIN      
        1 gaagagcttg cggggtttgc ggttgatggc cccgactgaa gggctggagg cggtgtatgc
       61 cgctgttctt gctgtcgctc ccgacacctc cgtccgcttc tggtcatgag aggagacaga
      121 ggcctgaagc aaagacatct gggtcagaga aaaagtattt aagggccatg caagccaatc
      181 gtagccaact gcacagtcct ccaggaactg gaagcagtga ggatgcctca acccctcagt
      241 gtgtccacac aagattgaca ggagagggtt cttgccctca ttctggagat gttcatatcc
      301 agataaactc catacctaaa gaatgtgcag aaaatgcaag ctccagaaat ataaggtcag
      361 gtgtccatag ctgtgcccat ggatgtgtac acagtcgctt acggggtcac tcccacagtg
      421 aagcaaggct gactgatgat actgccgcag aatctggaga tcatggtagt agctccttct
      481 cagaattccg ctatctcttc aagtggctgc aaaaaagtct tccatatatt ttgattctga
      541 gcgtcaaact tgttatgcag catataacag gaatttctct tggaattggg ctgctaacaa
      601 cttttatgta tgcaaacaaa agcattgtaa atcaggtttt tctaagagaa aggtcctcaa
      661 agattcagtg tgcttggtta ctggtattct tagcaggatc ttctgttctt ttatattaca
      721 cctttcattc tcagtcactt tattacagct taattttttt aaatcctact ttggaccatt
      781 tgagcttctg ggaagtattt tggattgttg gaattacaga cttcattctg aaattctttt
      841 tcatgggctt aaaatgcctt attttattgg tgccttcttt catcatgcct tttaaatcta
      901 agggttactg gtatatgctt ttagaagaat tgtgtcaata ctaccgaact tttgttccca
      961 taccagtttg gtttcgctac cttataagct atggggagtt tggtaacgta actagatgga
     1021 gtcttgggat actgctggct ttactctacc tcatattaaa acttttggaa ttttttgggc
     1081 atctgagaac tttcagacag gttttacgaa tattttttac acaaccaagt tatggagtgg
     1141 ctgccagcaa gagacagtgt tcagatgtgg atgatatttg ttcaatatgt caagctgaat
     1201 ttcagaagcc aattcttctc atttgtcagc atatattttg tgaagagtgc atgaccttat
     1261 ggtttaacag agagaaaaca tgtccactct gcagaactgt gatttcagac catataaaca
     1321 aatggaagga tggagccact tcatcacacc ttcaaatata ttaagttgta taaactatca
     1381 aggccacaaa atactaatgt catttggtca taatgactac tgataaggca tcagaatgga
     1441 ttttcagggc taccagaaaa atgtttccag atggttttag aatgtaggac ttatgatcca
     1501 attcaccaaa agattaaatg aaaccaccct gtgttttaaa atatatataa tgttcaacct
     1561 aatgtatatg caacatttat tctattctaa ttatttgaca ggtaactgca gtgttaaatt
     1621 gtaaatgtgt tttctttatg ttaccaaaac agcaatttga aattagaact agtggtttta
     1681 gagaactcag gtattctttc ctgacattgt tttcagaata aagaatattt ttcataatat
     1741 tttaagatac atactatcta aaagtagaat tttgttcagc attgactttt ataattccca
     1801 tcctaaaaat tcttaatatt ttcataaaat ttgtattttt aaatgaaaat tctaaatgtt
     1861 gtattttatc agtaacattt tctaagtgaa gattaattta ctgaggatga tacattatag
     1921 tattgtatta ttctctgtag taagattagt aataagtgaa aataaatgat ttaaattcaa
     1981 aaaaaaaaaa aaaa
//