LOCUS BC088365 1994 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens ring finger protein, transmembrane 1, mRNA (cDNA clone MGC:111090 IMAGE:30390062), complete cds. ACCESSION BC088365 VERSION BC088365.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1994) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1994) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Michael Brownstein cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 196 Row: i Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361528. FEATURES Location/Qualifiers source 1..1994 /db_xref="H-InvDB:HIT000266199" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:111090 IMAGE:30390062" /tissue_type="Testis" /clone_lib="NIH_MGC_180" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..1994 /gene="RNFT1" /gene_synonym="PTD016" /db_xref="GeneID:51136" /db_xref="HGNC:HGNC:30206" CDS 57..1364 /gene="RNFT1" /gene_synonym="PTD016" /codon_start=1 /product="ring finger protein, transmembrane 1" /protein_id="AAH88365.2" /db_xref="GeneID:51136" /db_xref="HGNC:HGNC:30206" /translation="MPLFLLSLPTPPSASGHERRQRPEAKTSGSEKKYLRAMQANRSQ LHSPPGTGSSEDASTPQCVHTRLTGEGSCPHSGDVHIQINSIPKECAENASSRNIRSG VHSCAHGCVHSRLRGHSHSEARLTDDTAAESGDHGSSSFSEFRYLFKWLQKSLPYILI LSVKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERSSKIQCAWLLVFLAGSSVL LYYTFHSQSLYYSLIFLNPTLDHLSFWEVFWIVGITDFILKFFFMGLKCLILLVPSFI MPFKSKGYWYMLLEELCQYYRTFVPIPVWFRYLISYGEFGNVTRWSLGILLALLYLIL KLLEFFGHLRTFRQVLRIFFTQPSYGVAASKRQCSDVDDICSICQAEFQKPILLICQH IFCEECMTLWFNREKTCPLCRTVISDHINKWKDGATSSHLQIY" BASE COUNT 607 a 347 c 382 g 658 t ORIGIN 1 gaagagcttg cggggtttgc ggttgatggc cccgactgaa gggctggagg cggtgtatgc 61 cgctgttctt gctgtcgctc ccgacacctc cgtccgcttc tggtcatgag aggagacaga 121 ggcctgaagc aaagacatct gggtcagaga aaaagtattt aagggccatg caagccaatc 181 gtagccaact gcacagtcct ccaggaactg gaagcagtga ggatgcctca acccctcagt 241 gtgtccacac aagattgaca ggagagggtt cttgccctca ttctggagat gttcatatcc 301 agataaactc catacctaaa gaatgtgcag aaaatgcaag ctccagaaat ataaggtcag 361 gtgtccatag ctgtgcccat ggatgtgtac acagtcgctt acggggtcac tcccacagtg 421 aagcaaggct gactgatgat actgccgcag aatctggaga tcatggtagt agctccttct 481 cagaattccg ctatctcttc aagtggctgc aaaaaagtct tccatatatt ttgattctga 541 gcgtcaaact tgttatgcag catataacag gaatttctct tggaattggg ctgctaacaa 601 cttttatgta tgcaaacaaa agcattgtaa atcaggtttt tctaagagaa aggtcctcaa 661 agattcagtg tgcttggtta ctggtattct tagcaggatc ttctgttctt ttatattaca 721 cctttcattc tcagtcactt tattacagct taattttttt aaatcctact ttggaccatt 781 tgagcttctg ggaagtattt tggattgttg gaattacaga cttcattctg aaattctttt 841 tcatgggctt aaaatgcctt attttattgg tgccttcttt catcatgcct tttaaatcta 901 agggttactg gtatatgctt ttagaagaat tgtgtcaata ctaccgaact tttgttccca 961 taccagtttg gtttcgctac cttataagct atggggagtt tggtaacgta actagatgga 1021 gtcttgggat actgctggct ttactctacc tcatattaaa acttttggaa ttttttgggc 1081 atctgagaac tttcagacag gttttacgaa tattttttac acaaccaagt tatggagtgg 1141 ctgccagcaa gagacagtgt tcagatgtgg atgatatttg ttcaatatgt caagctgaat 1201 ttcagaagcc aattcttctc atttgtcagc atatattttg tgaagagtgc atgaccttat 1261 ggtttaacag agagaaaaca tgtccactct gcagaactgt gatttcagac catataaaca 1321 aatggaagga tggagccact tcatcacacc ttcaaatata ttaagttgta taaactatca 1381 aggccacaaa atactaatgt catttggtca taatgactac tgataaggca tcagaatgga 1441 ttttcagggc taccagaaaa atgtttccag atggttttag aatgtaggac ttatgatcca 1501 attcaccaaa agattaaatg aaaccaccct gtgttttaaa atatatataa tgttcaacct 1561 aatgtatatg caacatttat tctattctaa ttatttgaca ggtaactgca gtgttaaatt 1621 gtaaatgtgt tttctttatg ttaccaaaac agcaatttga aattagaact agtggtttta 1681 gagaactcag gtattctttc ctgacattgt tttcagaata aagaatattt ttcataatat 1741 tttaagatac atactatcta aaagtagaat tttgttcagc attgactttt ataattccca 1801 tcctaaaaat tcttaatatt ttcataaaat ttgtattttt aaatgaaaat tctaaatgtt 1861 gtattttatc agtaacattt tctaagtgaa gattaattta ctgaggatga tacattatag 1921 tattgtatta ttctctgtag taagattagt aataagtgaa aataaatgat ttaaattcaa 1981 aaaaaaaaaa aaaa //