LOCUS BC088356 1773 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens malate dehydrogenase 1B, NAD (soluble), mRNA (cDNA
clone MGC:111059 IMAGE:30383553), complete cds.
ACCESSION BC088356
VERSION BC088356.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1773)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1773)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: g Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46047431.
FEATURES Location/Qualifiers
source 1..1773
/db_xref="H-InvDB:HIT000266190"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111059 IMAGE:30383553"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1773
/gene="MDH1B"
/gene_synonym="FLJ25341"
/gene_synonym="RP11-95H11"
/db_xref="GeneID:130752"
/db_xref="HGNC:HGNC:17836"
CDS 33..1589
/gene="MDH1B"
/gene_synonym="FLJ25341"
/gene_synonym="RP11-95H11"
/codon_start=1
/product="malate dehydrogenase 1B, NAD (soluble)"
/protein_id="AAH88356.1"
/db_xref="GeneID:130752"
/db_xref="HGNC:HGNC:17836"
/translation="MAKFVIAGRADCPYYAKTELVADYLQKNLPDFRIHKITQRPEVW
EDWLKDVCEKNKWSHKNSPIIWRELLDRGGKGLLLGGYNEFLEHAQLYYDVTSSMTTE
LMMVIAQENLGAHIEKEQEEEALKTCINPLQVWITSASAPACYNLIPILTSGEVFGMH
TEISITLFDNKQAEEHLKSLVVETQDLASPVLRSVSICTKVEEAFRQAHVIVVLDDST
NKEVFTLEDCLRSRVPLCRLYGYLIEKNAHESVRVIVGGRTFVNLKTVLLMRYAPRIA
HNIIAVALGVEGEAKAILARKLKTAPSYIKDVIIWGNISGNNYVDLRKTRVYRYESAI
WGPLHYSRPVLNLIFDSEWVKREFVAILKNLTTTGRQFGGILAAHSIATTLKYWYHGS
PPGEIVSLGILSEGQFGIPKGIVFSMPVKFENGTWVVLTDLKDVEISEQIMTRMTSDL
IQEKLVALGDKIHFQPYQSGHKDLVPDEEKNLAMSDAAEFPNQIPQTTFEKPQSLEFL
NEFEGKTVES"
BASE COUNT 569 a 344 c 415 g 445 t
ORIGIN
1 ccgcggtccc tgcctctgag tctctctcga ccatggccaa attcgtcatc gcgggtagag
61 cagattgtcc atattatgct aaaacagaac ttgtggcaga ctatttacaa aagaatcttc
121 ctgattttcg gatacataaa atcacacaac gtcctgaggt ttgggaggat tggctaaaag
181 atgtgtgtga aaagaataag tggagtcaca agaattcccc tatcatctgg agagagctgt
241 tggatcgtgg aggaaagggt ttgcttttgg gaggatataa tgagttcctg gagcatgctc
301 agctttacta tgatgtcacc tctagcatga cgactgaact gatgatggta attgctcaag
361 agaacctggg ggcacatata gaaaaagagc aggaggaaga agccctgaaa acttgcatca
421 accccttgca ggtctggatc accagtgcct ctgctcctgc ctgctacaac ctaattccca
481 tattgacgag tggcgaagtg tttgggatgc atacagaaat tagcataact ctatttgaca
541 acaagcaggc ggaagaacat ctcaaaagcc ttgtggtgga gacccaagac ctggcatctc
601 ccgtcctgcg cagtgtctcc atctgcacga aggtggagga ggccttccgc caggcccacg
661 tcattgtggt gctggatgac agcaccaaca aggaggtgtt cactctggag gactgcctcc
721 gaagcagggt gcctctctgc aggctctatg ggtacctgat agagaaaaat gctcatgagt
781 ctgtcagagt catcgtggga gggagaacct ttgtaaacct gaagacagtt ttactcatga
841 gatatgcccc acgcattgca cacaacatta ttgctgtggc gctgggggtg gaaggtgaag
901 cgaaagccat actggccaga aaactgaaga cagctccttc atacattaaa gacgtgatca
961 tttggggtaa tatcagtgga aataattacg ttgatctgag aaaaacaagg gtgtacagat
1021 atgagagtgc catttgggga cctcttcatt attcacgccc tgttttaaac ttgatttttg
1081 acagtgagtg ggtaaaaaga gaatttgtgg caattcttaa aaacttgacc accacaggaa
1141 gacaatttgg aggcattttg gctgcacaca gtatagccac tacactgaaa tactggtacc
1201 atggctcacc acctggggag attgtatctt taggaatatt gagtgaaggc cagtttggta
1261 ttccgaaagg gatcgtcttt tctatgcctg tgaaatttga gaatggaact tgggtggttc
1321 ttacagatct caaagatgtt gaaataagtg aacaaataat gacccgaatg acaagtgatc
1381 taattcagga gaaacttgtt gcacttggag acaagataca ttttcagcca taccaatcag
1441 gacataaaga tctggtccct gatgaagaaa aaaatctagc tatgtcagat gcagcagagt
1501 ttccaaatca gattcctcaa accacctttg aaaagccaca gagtcttgag ttcctaaatg
1561 aatttgaagg caaaaccgtg gaatcctaac agatcaaatt ggatgaaata tataattact
1621 tgatagcaca ataaacatag aaagaattta tatgaatgtc tatatttaag gaagaataat
1681 ttgaaagatt tatgtcagtc ttagataata ccatgcaagg caattaaatc actgtgacag
1741 caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//