LOCUS BC088351 1888 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chaperonin containing TCP1, subunit 7 (eta), mRNA
(cDNA clone MGC:110985 IMAGE:6202511), complete cds.
ACCESSION BC088351
VERSION BC088351.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1888)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1888)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: c Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331183.
FEATURES Location/Qualifiers
source 1..1888
/db_xref="H-InvDB:HIT000266185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:110985 IMAGE:6202511"
/tissue_type="Peripheral Nervous System, sciatic nerve"
/clone_lib="Lupski_sciatic_nerve"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1888
/gene="CCT7"
/gene_synonym="CCT-ETA"
/gene_synonym="Ccth"
/gene_synonym="Nip7-1"
/gene_synonym="TCP-1-eta"
/db_xref="GeneID:10574"
/db_xref="HGNC:HGNC:1622"
/db_xref="MIM:605140"
CDS 99..1730
/gene="CCT7"
/gene_synonym="CCT-ETA"
/gene_synonym="Ccth"
/gene_synonym="Nip7-1"
/gene_synonym="TCP-1-eta"
/codon_start=1
/product="chaperonin containing TCP1, subunit 7 (eta)"
/protein_id="AAH88351.1"
/db_xref="GeneID:10574"
/db_xref="HGNC:HGNC:1622"
/db_xref="MIM:605140"
/translation="MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRG
MDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAA
EFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAM
TALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKK
TFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYD
KLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSV
NALSADVLGRCQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDA
IMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLC
DNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASE
AACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRPH"
BASE COUNT 480 a 434 c 533 g 441 t
ORIGIN
1 cttctgggta tttctattgc gcgaggcatt gtgggttgct gggcggcccg gtctcggaga
61 agaggggaga gtggcgggcc gctgaataag cttccaaaat gatgcccaca ccagttatcc
121 tattgaaaga ggggactgat agctcccaag gcatccccca gcttgtgagt aacatcagtg
181 cctgccaggt gattgctgag gctgtaagaa ctaccctggg tccccgtggc atggacaagc
241 ttattgtaga tggcagaggc aaagcaacaa tttctaatga tggggccaca attctgaaac
301 ttcttgatgt tgtccatcct gcagcaaaga ctttggtaga cattgccaaa tcccaagatg
361 ctgaggtggg tgatggcacc acctcagtga ccttgctggc tgcagagttt ctgaagcagg
421 tgaaacccta tgtggaggaa ggtttacacc cccagatcat cattcgagct ttccgcacag
481 ccacccagct ggcagttaac aagatcaaag agattgctgt gaccgtgaag aaggcagata
541 aagtggagca gaggaagctg ctggaaaagt gtgccatgac cgctctgagc tccaagctga
601 tctcccagca gaaagctttc tttgctaaga tggtggtgga tgcagtgatg atgctcgatg
661 atttgctgca gcttaaaatg attggaatca agaaggtaca gggtggagcc ctcgaggatt
721 ctcagctggt agctggtgtt gcattcaaga agactttctc ttacgctggg tttgaaatgc
781 aacccaaaaa gtaccacaat cccaagattg cccttttgaa tgtcgagctc gagttgaaag
841 ctgagaaaga caatgctgag ataagagtcc acacagttga ggattatcag gcaattgttg
901 atgctgagtg gaacattctc tatgacaagt tagagaagat ccatcattct ggagccaaag
961 ttgtcttgtc caaactcccc attggggatg tggccaccca gtactttgct gacagggaca
1021 tgttctgtgc tggccgagta cctgaggagg atctgaagag gacaatgatg gcctgtggag
1081 gctcaatcca gaccagtgtg aatgctctgt cagcagatgt gctgggtcga tgccaggtgt
1141 ttgaagagac ccagattgga ggcgagaggt acaatttttt tactggctgc cccaaggcca
1201 agacatgcac cttcattctc cgtggcggcg ccgagcagtt tatggaggag acagagcggt
1261 ccctgcatga tgccatcatg atcgtcagga gggccatcaa gaatgattca gtggtggctg
1321 gtggcggggc cattgagatg gaactctcca agtacctgcg ggattactca aggactattc
1381 caggaaaaca gcagctgttg attggggcat atgccaaggc cttggagatt atcccacgcc
1441 agctgtgtga caatgctggc tttgatgcca caaacattct caacaagctg cgggctcggc
1501 atgcccaggg gggtacatgg tatggagtag acatcaacaa cgaggacatt gctgacaact
1561 ttgaagcttt cgtgtgggag ccagctatgg tgcggatcaa tgcgctgaca gcagcctctg
1621 aggctgcgtg cctgatcgtg tctgtagatg aaaccatcaa gaacccccgc tcgactgtgg
1681 atgctcccac agcagcaggc cggggccgtg gtcgtggccg cccccactga gaggcacccc
1741 acccatcaca tggctggctg gctgctgggt gcacttaccc tccttggctt ggttacttca
1801 ttttacaagg aaggggtagt aattggccca ctctcttctt actggaggct atttaaataa
1861 aatgtaagac ttcaaaaaaa aaaaaaaa
//