LOCUS BC087845 2079 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens chromosome 18 open reading frame 10, mRNA (cDNA clone
MGC:102909 IMAGE:30390077), complete cds.
ACCESSION BC087845
VERSION BC087845.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2079)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2079)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein
cDNA Library Preparation: Invitrogen Corp
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 196 Row: i Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68534956.
FEATURES Location/Qualifiers
source 1..2079
/db_xref="H-InvDB:HIT000266167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:102909 IMAGE:30390077"
/tissue_type="Testis"
/clone_lib="NIH_MGC_180"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2079
/gene="C18orf10"
/gene_synonym="DKFZP586M1523"
/gene_synonym="HMFN0601"
/gene_synonym="HsT3006"
/gene_synonym="L17"
/db_xref="GeneID:25941"
/db_xref="HGNC:HGNC:24561"
CDS 429..1331
/gene="C18orf10"
/gene_synonym="DKFZP586M1523"
/gene_synonym="HMFN0601"
/gene_synonym="HsT3006"
/gene_synonym="L17"
/codon_start=1
/product="chromosome 18 open reading frame 10"
/protein_id="AAH87845.1"
/db_xref="GeneID:25941"
/db_xref="HGNC:HGNC:24561"
/translation="MEEEASSPGLGCSKPHLEKLTLGITRILESSPGVTEVTIIEKPP
AERHMISSWEQKNNCVMPEDVKNFYLMTNGFHMTWSVKLDEHIIPLGSMAINSISKLT
QLTQSSMYSLPNAPTLADLEDDTHEASDDQPEKPHFDSRSVIFELDSCNGSGKVCLVY
KSGKPALAEDTEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTSYGISPQA
KQWFSMYKPITYNTNLLTEETDSFVNKLDPSKVFKSKNKIVIPKKKGPVQPAGGQKGP
SGPSGPSTSSTSKSSSGSGNPTRK"
BASE COUNT 505 a 593 c 499 g 482 t
ORIGIN
1 gtcccggctc cagaacgccg cggcactggg gcgggagggg cccgccacgt ccgccatctt
61 gaaacaaccg ccactcgggg cgtcgcgcct gggccgccac gcctcggcct gcaggctcgg
121 tccccattgg ccgcaccacg cagaggcccg cccccgcctg cgcggccggc ccctgcgggg
181 cgagagggtc ggggcgaagg ggaagctacg tcccggaggt gcggtgtggg gcaccgggcg
241 gggccgcggg aaccggcgcc ccacggagct gctgctgtca gaccaacccc gggcccccat
301 catcactgcg ccgcgctttc aggcgccgag aactaccgtt cccggcatgc catgaaattg
361 gcctcggcgc tgaggcgggg tccggccctc cacccgctcc cgccgcgcgc gaatcgcggt
421 cgcgagccat ggaggaggag gcatcgtccc cggggctggg ctgcagcaag ccgcacctgg
481 agaagctgac cctgggcatc acgcgcatcc tagaatcttc cccaggtgtg actgaagtga
541 ccatcataga aaagcctcct gctgaacgtc atatgatttc ttcctgggaa caaaagaata
601 actgtgtgat gcctgaagat gtgaagaact tttacctgat gaccaatggc ttccacatga
661 catggagtgt gaagctggat gagcacatca ttccactggg aagcatggca attaacagca
721 tctcaaaact gactcagctc acccagtctt ccatgtattc acttcctaat gcacccactc
781 tggcagacct ggaggacgat acacatgaag ccagtgatga tcagccagag aagcctcact
841 ttgactctcg cagtgtgata tttgagctgg attcatgcaa tggcagtggg aaagtttgcc
901 ttgtctacaa aagtgggaaa ccagcattag cagaagacac tgagatctgg ttcctggaca
961 gagcgttata ctggcatttt ctcacagaca cctttactgc ctattaccgc ctgctcatca
1021 cccacctggg cctgccccag tggcaatatg ccttcaccag ctatggcatt agcccacagg
1081 ccaagcaatg gttcagcatg tataaaccta tcacctacaa cacaaacctg ctcacagaag
1141 agaccgactc ctttgtgaat aagctagatc ccagcaaagt gtttaagagc aagaacaaga
1201 tcgtaatccc aaaaaagaaa gggcctgtgc agcctgcagg tggccagaaa gggccctcag
1261 gaccctccgg tccctccact tcctccactt ctaaatcctc ctctggctct ggaaacccca
1321 cccggaagtg agcacccctc cctccaactc cctaccagct ccagagtggt ggtttccatg
1381 cacagatggc cctaggggtg acctccagtt ttgcgtgtgg accgtaggcc tctttctagt
1441 tgaatgacca aaattgtaag gcttttagtc ccaccgacat tagccaggct cgtagtgagg
1501 cctccagagc aggttgtgct gtcccctgcc tctggaagca atggggaatt tggaatcttg
1561 tgtaagtgcc caaataagtc tgagtgcttt cctcttcttc aacactcaac cctcaatccc
1621 ttagcactga ttgattagag aggtccccca aagaaaccac tggttttgac ccatgaagca
1681 ttagaactgc attgttcatt caggagccac tagtcacata tgactattta aatttaaagt
1741 aaattgtatg aaaaattcat ttcttcaatt gcattagcca cattttgagt attcatgtgg
1801 ctggtagatt ctgtattagc acaaagatat ggaacatttc catcaccaca gaaagttctg
1861 ttggacagca ctgcattaga atattttcat actgctcttc ctcaattaat ttttgttgtt
1921 aatgttgatg tcttcattgg atgggtcata atgttccatg aaacctctca agtacacaat
1981 tgtatgttct ttgtatccct taccacaaat atctcgctct gctcatttct tttgcagctt
2041 cctataaagt ttgtcttcct catcaaaaaa aaaaaaaaa
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