LOCUS BC086856 3324 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae), mRNA (cDNA clone MGC:105048 IMAGE:6166751), complete cds. ACCESSION BC086856 VERSION BC086856.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3324) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3324) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-DEC-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 200 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22035555. FEATURES Location/Qualifiers source 1..3324 /db_xref="H-InvDB:HIT000266128" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:105048 IMAGE:6166751" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3324 /gene="BRF1" /gene_synonym="BRF" /gene_synonym="hBRF" /gene_synonym="TAFIII90" /gene_synonym="TF3B90" /gene_synonym="TFIIIB90" /db_xref="GeneID:2972" /db_xref="MIM:604902" CDS 97..2049 /gene="BRF1" /gene_synonym="BRF" /gene_synonym="hBRF" /gene_synonym="TAFIII90" /gene_synonym="TF3B90" /gene_synonym="TFIIIB90" /codon_start=1 /product="BRF1 protein" /protein_id="AAH86856.1" /db_xref="GeneID:2972" /db_xref="MIM:604902" /translation="MTGRVCRGCGGTDIELDAARGDAVCTACGSVLEDNIIVSEVQFV ESSGGGSSAVGQFVSLDGRRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMA HVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYI PRFAHLLEFGEKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRT VKEVISVVKVCESTLRKRLTEFEDTPTSQLTIDEFMKIDLEEECDPPSYTAGQRKLRM KQLEQVLSKKLEEVEGEISSYQDAIEIELENSRPKAKGGLASLAKDGSTEDTASSLCG EEDTEDEELEAAASHLNKDLYRELLGGAPGSSEAAGSPEWGGRPPALGSLLDPLPTAA SLGISDSIRECISSQSSDPKDASGDGELDLSGIDDLEIDRYILNESEARVKAELWMRE NAEYLREQREKEARIAKEKELGIYKEHKPKKSCKRREPIQASTAREAIEKMLEQKKIS SKINYSVLRGLSSAGGGSPHREDAQPEHSASARKLSRRRTPASRSGADPVTSVGKRLR PLVSTQPAKKVATGEALLPSSPTLGAEPARPQAVLVESGPVSYHADEEADEEEPDEED GEPCVSALQMMGSNDYGCDGDEDDGY" BASE COUNT 680 a 990 c 1107 g 547 t ORIGIN 1 gcggctgggc ctgggcgggc ggcgcgggct gctccggagg ctcgggtggc ttgagagtct 61 tgggaggctc cgggcgctgc ccgcgcggtc gccggcatga cgggccgtgt gtgccgcggt 121 tgcggcggca cggacatcga gctggacgcg gcgcgcgggg acgcggtgtg caccgcctgc 181 ggctcagtgc tggaggacaa catcatcgtg tccgaggtgc agttcgtgga gagcagcggc 241 ggcggctcct cggccgtggg ccagttcgtg tccctggacg ggaggcgcca catccaccac 301 ctggggaacc agctgcagct gaaccagcac tgcctggaca ccgccttcaa cttcttcaag 361 atggccgtga gcaggcacct gacccgcggc cggaagatgg cccacgtgat tgctgcctgc 421 ctctacctgg tctgccgtac ggagggcacg ccgcacatgc tcctggacct cagcgacctg 481 ctccaggtga atgtgtacgt gcttggaaag acgtttcttc tcttggcaag agagctctgc 541 atcaatgcgc cggccataga cccgtgcctg tatattccac gctttgcgca cctgctggaa 601 ttcggggaga agaaccacga ggtgtccatg actgccctga ggctcctaca gaggatgaag 661 cgggactgga tgcacacagg ccggcgcccc tcgggcctct gcggagcagc gctcctggtt 721 gcagccagaa tgcatgactt caggaggact gtgaaggagg tcatcagtgt ggtcaaagtg 781 tgtgagtcca cgctgcggaa gaggctcacg gaatttgaag acacccccac cagtcagttg 841 accattgatg agttcatgaa gatcgacctg gaggaggagt gcgacccccc ctcgtacaca 901 gctgggcaga ggaagctgcg gatgaagcag cttgaacaag tcctgtcaaa aaaactggag 961 gaggttgaag gtgaaatatc cagttaccag gatgcaattg agattgaact agaaaacagc 1021 cggccaaagg ccaagggggg cctggccagc ctggcaaaag atggctccac cgaggacacc 1081 gcgtccagct tgtgtggcga ggaggacaca gaggacgagg agctggaagc cgcggccagc 1141 cacctgaaca aagacttata ccgggagctc cttggtggtg cccccggcag ctcggaagca 1201 gcaggaagcc ccgagtgggg cggcagacct ccggccctgg ggtccctgct ggaccccctc 1261 cccactgcag ccagcctggg catctcagac tccatccgcg aatgcatctc ctctcagagc 1321 agcgacccca aagatgcttc aggagacggt gagctggacc tcagtggcat tgatgacctg 1381 gagattgaca ggtacatcct gaatgagtcg gaagcccgcg tgaaggccga gctgtggatg 1441 agggagaacg ccgagtacct gcgggaacag agggaaaaag aagcaagaat agcgaaagag 1501 aaggagctcg gcatctacaa ggaacacaag cccaagaagt cttgcaagcg acgggagcca 1561 attcaggcca gtaccgccag ggaggccatc gagaagatgc tggagcagaa gaagatctcc 1621 agcaagatca attatagcgt gctccggggc ctcagcagcg ccggcggggg cagtccgcac 1681 agggaggatg cacagcccga gcatagcgcc agtgccagga agctgtcacg aaggaggacg 1741 ccggccagca gaagtggggc tgaccctgtg accagtgtgg ggaaaaggtt gaggcctctg 1801 gtgtctacgc agccagcaaa gaaggtggcc acgggagagg ctttgctccc aagctctccc 1861 accctcggag ctgagcctgc caggccccag gcggtgctgg tggagagcgg gcccgtgtca 1921 taccacgccg acgaggaggc tgacgaggag gagcctgacg aggaggacgg ggagccctgc 1981 gtcagtgccc tgcagatgat gggcagcaac gactatggct gtgatggcga tgaggacgac 2041 ggctactgaa gtgtggcctc caggcaggtg atgtcctggc agggggcctc gcgggtctcc 2101 tcagcatcag acgggcttcc aggaccgcag caggcaggcc ccagcgccga gactcctggt 2161 gacaggtggc acctgtccca cagccctcgt cccatgtgga acttaccatt gggattgtgt 2221 ttctattcag caagggaaac cggaccaagc gtctgcatgt gtgtgatcag atgtgggccg 2281 ggtgtgtgca gggctgggtc ccgctgcctg ccgtcgactc atccaaggac cctccaaggc 2341 tggcagtgtg gtgttgctac tattaaggaa acaggcttgg ggcagcccca ctgctggtcc 2401 aagtgtgtgg agggctgagt gtgctggccc tgtgactcag gaccagctct ggagtctcca 2461 gcccaccctc cgcaccgtcc cctcctgagc agcactcggc gccagcagcc tctgccagag 2521 tggaagccag agccctgcag gtgtccggcg cagccgtggg agctgaggat ctggcacttg 2581 agaggcagca gctccttgaa ggtcctctgc ctccagctgt ggccctgcat ccagatacct 2641 gcctcgtccg aggcagacac ccccacccct gcctcctcca gacccccctc cccgctgcct 2701 gcaccgcctg gagcagcatg ggggtcagac ccctgctcca gggccacttg agttgtgggc 2761 ccaggagccc tgcggctgcc ggcaggtgaa ctgagtgccc gacagctgag accggcgccc 2821 acccgtcctg agcatagctc tgtaggcagt gcgggcatag cctgcatagt gtcctggcgc 2881 tgggagttcc ccgtggacag agccagaggg cagtggcgct ccctgtcaga gctggatcag 2941 gccccccatc gaggagggag ggcagacgga ggcccgagag cctccccagg cctcttcgtg 3001 ggaaggcccc agtaccactc gtaggaggtc tcagctctgg catggctgcc ccggatgtgg 3061 ccgagggggc ttcaccctgt gtccttagga gggggtggcc ttgaggcaga gccgtgcctc 3121 actgaccccc aggggcctca tcctccccat ggaatgggct gtatgtcctg ccccaacttg 3181 gcccgcagca ggccagaccc ccctaccccc gcccagagct cagtagccag cctgggtcct 3241 gccagggctt ctcgagggct tgggggaaga atagatttag taaagcagga agatctgttg 3301 ttacttaaca aaaaaaaaaa aaaa //