LOCUS BC085621 1635 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens spermine synthase, mRNA (cDNA clone MGC:87819
IMAGE:5540463), complete cds.
ACCESSION BC085621
VERSION BC085621.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1635)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1635)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: o Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21264340.
FEATURES Location/Qualifiers
source 1..1635
/db_xref="H-InvDB:HIT000266120"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87819 IMAGE:5540463"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1635
/gene="SMS"
/gene_synonym="MRSR"
/gene_synonym="SPMSY"
/gene_synonym="SpS"
/gene_synonym="SRS"
/db_xref="GeneID:6611"
/db_xref="HGNC:HGNC:11123"
/db_xref="MIM:300105"
CDS 45..1145
/gene="SMS"
/gene_synonym="MRSR"
/gene_synonym="SPMSY"
/gene_synonym="SpS"
/gene_synonym="SRS"
/codon_start=1
/product="spermine synthase"
/protein_id="AAH85621.1"
/db_xref="GeneID:6611"
/db_xref="HGNC:HGNC:11123"
/db_xref="MIM:300105"
/translation="MAAARHSTLDFMLGAKADGETILKGLQSIFQEQGMAESVHTWQD
HGYLATYTNKNGSFANLRIYPHGLVLLDLQSYDGDAQGKEEIDSILNKVEERMKELSQ
DSTGRVKRLPPIVRGGAIDRYWPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFGN
ILILSGDVNLAESDLAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTM
VEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVIND
LTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGR
LYCPVEFSKEIVCVPSYLELWVFYTVWKKAKP"
BASE COUNT 492 a 296 c 397 g 450 t
ORIGIN
1 cccgcggctg ctcccccagg catggcacag ggcctcgcct cactatggca gcagcacggc
61 acagcacgct cgacttcatg ctcggcgcca aagctgatgg tgagaccatt ctaaaaggcc
121 tccagtccat tttccaggag caggggatgg cggagtcggt gcacacctgg caggaccatg
181 gctatttagc aacctacaca aacaagaacg gcagctttgc caatttgaga atttacccac
241 atggattggt gttgctggac cttcagagtt atgatggtga tgcgcaaggc aaagaagaga
301 tcgacagtat tttgaacaaa gtagaggaaa gaatgaaaga attgagtcag gacagtactg
361 ggcgggtgaa acgattacca cccatagtgc gaggaggagc catcgacaga tactggccca
421 ccgccgacgg gcgcctggtt gaatatgaca tagatgaagt ggtatatgac gaagattcac
481 cttatcaaaa tataaaaatt ctacactcga agcagtttgg aaatattctc atccttagtg
541 gggatgttaa tttggcagag agtgatttgg catatacccg ggccatcatg ggcagtggca
601 aagaagatta cactggcaaa gatgtactca ttctgggagg tggagacgga ggcatattgt
661 gtgaaatagt caaactaaaa ccaaagatgg tcactatggt agagattgac caaatggtga
721 ttgatgggtg taagaaatac atgcgaaaaa cgtgtggcga tgtcttagac aatcttaaag
781 gagactgcta tcaggttcta atagaagact gtatcccggt actgaagagg tacgccaaag
841 aagggagaga atttgattat gtgattaatg atttgacagc tgttccaatc tccacgtctc
901 cagaagaaga ttccacatgg gagtttctca gactgattct tgacctctca atgaaagtgt
961 tgaaacagga tgggaaatat tttacacagg ggaactgtgt caatctgaca gaagcactgt
1021 cgctctatga agaacagctg gggcgcctgt attgtcctgt ggaattttca aaggagatcg
1081 tctgtgtccc ttcatacttg gaattgtggg tattttacac tgtttggaag aaagctaaac
1141 cctgaagatc agtagcccct aatcacatgt gctgcaaata gccttcctga cctccatatg
1201 ctgtacatga catcaaaatg agtcaggcaa ttgattgtga attccttaaa gttttccttt
1261 ttttaataat tatttttaat ttaaaaaagc aaatggaaaa tgtatatttt gatgagctta
1321 gggtgttttt ttttgaaagt cagctgaagg atggttagac agcacagcga agactgctaa
1381 atgcactgac cccccccatt agaatgtgat ttttgttcct ttttatttct ctgtgggctt
1441 ttgtttttgt ttttgttttg gtagatcttc aatttggata tttggaggag tgaacatcgt
1501 tgttttgctg gagggaagat cttgatggtg tttctttccc caaaaattga cttagatatt
1561 aaaatttggt gcttataaga gagagttaaa aaaaaatagg attgcttcaa ttaaaattac
1621 aaaaaaaaaa aaaaa
//