LOCUS BC085612 2242 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptotagmin-like 3, mRNA (cDNA clone MGC:105130 IMAGE:30707698), complete cds. ACCESSION BC085612 VERSION BC085612.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2242) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2242) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-NOV-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: James Martin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 201 Row: b Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58000458. FEATURES Location/Qualifiers source 1..2242 /db_xref="H-InvDB:HIT000266117" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:105130 IMAGE:30707698" /tissue_type="Chondrosarcoma, myxoid chondrosarcoma Grade II, mixture of 3 cell lines, enriched for 3-4 Kb mRNA" /clone_lib="NIH_MGC_220" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..2242 /gene="SYTL3" /gene_synonym="SLP3" /db_xref="GeneID:94120" /db_xref="HGNC:HGNC:15587" CDS 330..1958 /gene="SYTL3" /gene_synonym="SLP3" /codon_start=1 /product="synaptotagmin-like 3" /protein_id="AAH85612.1" /db_xref="GeneID:94120" /db_xref="HGNC:HGNC:15587" /translation="MAQEIDLSALKELEREAILQVLYRDQAVQNTEEERTRKLKTHLQ HLRWKGAKNTDWEHKEKCCARCQQVLGFLLHRGAVCRGCSHRVCAQCRVFLRGTHAWK CTVCFEDRNVKIKTGEWFYEERAKKFPTGGKHETVGGQLLQSYQKLSKISVVPPTPPP VSESQCSRSPGRKVSAPDILKPLNQEDPKCSTNPILKQQNLPSSPAPSTIFSGGFRHG SLISIDSTCTEMGNFDNANVTGEIEFAIHYCFKTHSLEICIKACKNLAYGEEKKKKCN PYVKTYLLPDRSSQGKRKTGVQRNTVDPTFQETLKYQVAPAQLVTRQLQVSVWHLGTL ARRVFLGEVIIPLATWDFEDSTTQSFRWHPLRAKAEKYEDSVPQSNGELTVRAKLVLP SRPRKLQEAQEGTDQPSLHGQLCLVVLGAKNLPVRPDGTLNSFVKGCLTLPDQQKLRL KSPVLRKQACPQWKHSFVFSGVTPAQLRQSSLELTVWDQALFGMNDRLLGGTRLGSKG DTAVGGDACSQSKLQWQKVLSSPNLWTDMTLVLH" BASE COUNT 595 a 554 c 605 g 488 t ORIGIN 1 cagatgcgaa ggctccccga atgagaaaga atactcggaa tcagcggtga attgcagtga 61 tctttcagag aaagcgcctg ttcaactttg tcctctctca gagactcaga gccttggggc 121 actgagggat gccagttctg cctgttcatc tggaacctgg atctaaggag ggaagaggcg 181 ttgcccctgc tggcatagtc aggtattgaa cgggctgagc ttttcatgat ggttcctgct 241 gacctggaaa catcttaaat ggaagggcgt gagcgcttgg tccatgcagt gaagctcttc 301 caacctgggt caacgaaaac ggagaagaaa tggcccaaga aatagatctg agtgctctca 361 aggagttaga acgcgaggcc attctccagg tcctgtaccg agaccaggcg gttcaaaaca 421 cagaggagga gaggacacgg aaactgaaaa cacacctgca gcatctccgg tggaaaggag 481 cgaagaacac ggactgggag cacaaagaga agtgctgtgc gcgctgccag caggtgctgg 541 ggttcctgct gcaccggggc gccgtgtgcc ggggctgcag ccaccgcgtg tgtgcccagt 601 gccgagtgtt cctgaggggg acccatgcct ggaagtgcac ggtgtgcttc gaggacagga 661 atgtcaaaat aaaaactgga gaatggttct atgaggaacg agccaagaaa tttccaactg 721 gaggcaaaca tgagacagtt ggagggcagc tcttgcaatc ttatcagaag ctgagcaaaa 781 tttctgtggt tcctcctact ccacctcctg tcagcgagag ccagtgcagc cgcagtcctg 841 gcaggaaggt cagtgcacca gatattctga aacctctcaa tcaagaggat cccaaatgct 901 ctactaaccc tattttgaag caacagaatc tcccatccag tccggcaccc agtaccatat 961 tctctggagg ttttagacac ggaagtttaa ttagcattga cagcacctgt acagagatgg 1021 gcaattttga caatgctaat gtcactggag aaatagaatt tgccattcat tattgcttca 1081 aaacccattc tttagaaata tgcatcaagg cctgtaagaa ccttgcctat ggagaagaaa 1141 agaagaaaaa gtgcaatccg tatgtgaaga cctacctgtt gcccgacaga tcctcccagg 1201 gaaagcgcaa gactggagtc caaaggaaca ccgtggaccc gacctttcag gagaccttga 1261 agtatcaggt ggcccctgcc cagctggtga cccggcagct gcaggtctcg gtgtggcatc 1321 tgggcacgct ggcccggaga gtgtttcttg gagaagtgat cattcctctg gccacgtggg 1381 actttgaaga cagcacaaca cagtccttcc gctggcatcc gctccgggcc aaggcggaga 1441 aatacgaaga cagcgttcct cagagtaatg gagagctcac agtccgggct aagctggttc 1501 tcccttcacg gcccagaaaa ctccaagagg ctcaagaagg gacagatcag ccatcacttc 1561 atggtcaact ttgtttggta gtgctaggag ccaagaattt acctgtgcgg ccagatggca 1621 ccttgaactc atttgttaag ggctgtctca ctctgccaga ccaacaaaaa ctgagactga 1681 agtcgccagt cctgaggaag caggcttgcc cccagtggaa acactcattt gtcttcagtg 1741 gcgtaacccc agctcagctg aggcagtcga gcttggagtt aactgtctgg gatcaggccc 1801 tctttggaat gaacgaccgc ttgcttggag gaaccagact tggttcaaag ggagacacag 1861 ctgttggcgg ggatgcatgc tcacaatcga agctccagtg gcagaaagtc ctttccagcc 1921 ccaatctatg gacagacatg actcttgtcc tgcactgaca tgaaggcctc aaggttccag 1981 gttgcagcag gcgtgaggca ctgtgcgtct gcagaggggc tacgaaccag gtgcagggtc 2041 ccagctggag acccctttga ccttgagcag tctccatctg cggccctgtc ccatggctta 2101 accgcctatt ggtatctgtg tatatttacg ttaaacacaa ttatgttacc taagcctctg 2161 gtgggttatc tcctctttga gatgtagaaa atggccagat tttaataaac gttgttaccc 2221 atgaaaaaaa aaaaaaaaaa aa //