LOCUS BC085611 3599 bp mRNA linear HTC 19-OCT-2006
DEFINITION Homo sapiens cDNA clone IMAGE:30707963, containing frame-shift
errors.
ACCESSION BC085611
VERSION BC085611.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3599)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3599)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Martin, University of Iowa
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 201 Row: b Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31657113
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..3599
/db_xref="H-InvDB:HIT000266116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30707963"
/tissue_type="Chondrosarcoma, myxoid chondrosarcoma Grade
II, mixture of 3 cell lines, enriched for 4-5 Kb mRNA"
/clone_lib="NIH_MGC_221"
/lab_host="DH10B"
/note="Vector: pYX-ASC"
BASE COUNT 1171 a 678 c 853 g 897 t
ORIGIN
1 gcatacggtg caacgggtcc gcgggaatct tggatgcgcg gaggtcccga gaccaggtgc
61 gtgtgctaag ctcaggtctg agcacggtgg atcccatggg tgtggctctg aggaaattga
121 cgcagtggac tgctgccgga catggaactg gaatcctcga aatcacccct ctaaatgaag
181 cgatattgaa agaaattatt gtgtttgtgg agagttttat ctataaacat cctcaagagg
241 caaaatttgt ttttgtggaa ccacttgaat ggaacacaag tttggcgccc tcagcatttg
301 aatcaggtta tgttgtcagt gaaacaacag tcaaatcaga agaagttgat aaaaatggac
361 agcctttgct atttctctct gtaccacaaa ttaaaattag gagctttggg cagctgtcac
421 gcttgttact tattgccaaa actgggaagt tgaaggaagc ccaagcatgt gttgaagcta
481 acagagaccc catagtaaaa atcctgggct ctgattataa tacaatgaaa gaaaactcaa
541 ttgcattaaa tattcttggc aaaattacca gagatgatga tcctgaaagt gaaattaaga
601 tgaagattgc tatgctgctt aagcaattgg atctgcacct cctcaatcat tctctaaaac
661 atatttcatt agaaataagt ttaagtccca tgacggtgaa gaaggatata gaactgctca
721 aacgtttctc aggaaaagga aaccaaacag tcttggaatc tattgaatat acctcagatt
781 atgaattttc aaatggatgt cgagccccac cgtggagaca aattcgtggg gaaatttgtt
841 atgtgctggt gaaacctcac gatggtgaga ctctgtgcat tacttgcagt gcaggaggag
901 tatttttaaa tggtggcaaa acagatgatg aaggggacgt taattatgag agaaaaggtt
961 caatttataa aaaccttgtc acatttttaa gagaaaaatc accaaaattt tcagaaaata
1021 tgtctaaatt gggaattagc ttcagtgaag accagcaaaa ggaaaaggat cagcttggca
1081 aagcccccaa gaaggaagaa gcagctgccc tccgcaaaga catttctggt tcagacaaaa
1141 ggtcactgga gaagaaccaa attaattttt ggaggaatca aatgaccaag agatgggaac
1201 caagcttaaa ctggaagacc actgttaatt acaaaggcaa aggctcagca aaagaaatcc
1261 aagaggacaa acacacagga aaacttgaaa aaccaagacc atctgtttca cacggaagag
1321 cacaattact tcggaagagt gctgaaaaga ttgaggaaac tgttagcgat agctcctcag
1381 aaagtgagga agatgaagaa ccacctgacc atcgtcagga agcaagtgca gatttgccat
1441 cagaatattg gcaaattcag aagctggtga aatatttaaa gggaggaaat caaacagcta
1501 cagtgattgc gttgtgttca atgagggatt tcagcttagc tcaagaaacc tgccagttgg
1561 ccatcagaga tgttggaggc ctggaagtgc tgataaattt gcttgaaacc gatgaagtca
1621 aatgtaagat tggttcatta aaaatactga aggaaatcag tcataatcct caaatcagac
1681 agaatattgt tgaccttggg ggcttaccaa ttatggtgaa tatacttgat tctccacaca
1741 agagtctaaa atgtttggca gccgagacta tcgcgaatgt tgccaagttt aaaagagcac
1801 ggcgggtggt gaggcagcac gggggtatca ccaaactggt tgctctacta gactgtgcac
1861 atgattccac aaaacctgcc caatcgagtc tgtatgaggc cagagacgtg gaagtggctc
1921 gctgtggggc actggccctg tggagctgca gtaagagtca tacgaataaa gaagccatcc
1981 gcaaagctgg gggcattcct ctgttggctc ggctgctgaa gacttctcat gaaaacatgc
2041 taattccagt ggtggggaca ttgcaagagt gtgcatcaga ggaaaactac cgggctgcaa
2101 tcaaagcaga aaggatcatt gaaaaccttg tcaagaacct aaatagtgag aatgagcagc
2161 tgcaggagca ctgcgccatg gccatttacc agtgtgctga agataaggaa acccgggacc
2221 tcgttaggct gcacggagga cttaagccct tggccagtct actcaataac actgacaata
2281 aagagcggtt agctgctgtc acaggggcta tatggaaatg ttccatcagc aaagagaatg
2341 ttaccaagtt tcgggaatac aaagccattg aaaccttggt gggacttcta acagatcagc
2401 ctgaagaagt acttgtgaat gtggttgggg ccttgggaga atgcttccaa gaacgtgaaa
2461 accgagtcat tgtccggaaa tgtggtggca ttcaaccact tgtgaacctc cttgttggaa
2521 taaaccaagc tcttcttgtg aatgttacaa aagcagttgg tgcttgtgca gtagaacctg
2581 aaagtatgat gataattgat cgcttagatg gagttcgttt gttgtggtcc ctgctgaaaa
2641 atcctcaccc agacgtgaag gccagcgcag catgggcact ctgtccatgc atcaaaaatg
2701 cacgatgctg gggaaatggt tcgttccttt gttggtggtt tggaacttat tgtcaattta
2761 ctgaaatcag ataacaaaga agttctggca agtgtatgtg ctgccattac caacatagca
2821 aaagatcaag aaaatttagc tgttatcaca gatcatggag ttgttccttt attgtccaaa
2881 ctggcaaata caaataacaa taaattgaga catcatctag cagaagctat ttcacgttgc
2941 tgtatgtggg gcaggaatag agtggccttc ggtgagcaca aagcagtggc tccactagtg
3001 cgttatctga aatcaaatga caccaacgtg catcgggcga cagctcaggc cttgtaccaa
3061 ctctcagaag acgccgataa ctgcatcacc atgcatgaga atggtgcagt aaagcttcta
3121 ctggatatgg ttgggtcccc tgaccaggat ctccaggaag ctgcagctgg ttgtatatcc
3181 aatatccgca ggctggctct tgctacagag aaggcaagat acacttgaaa tttaaatgga
3241 cattacaagc tatcaaattc tacatgacac aggacatgtc actcccatgg ccagaaagcc
3301 taaattggga aacagttgtt agcaaaccct ttcaaccatc taaatgaaaa cacacaagtt
3361 gaaaatgcac agaatgtttt tcatctgaaa attgcatgga gacttttgtt tctatttaat
3421 gttttcgaga tatgacatgt gataagatgg aaagccaata aacctgtgat aagtttctaa
3481 gaatatgaga atatacgtat atgatgtatt tttagttcag tgatgctttt gtatttgtgg
3541 cgattttaat aaaggatatg gccttcccaa tgcaaaaaaa aaaaaaaaaa aaaaaaaaa
//