LOCUS BC085196 1681 bp mRNA linear HUM 08-NOV-2004
DEFINITION Homo sapiens mitogen-activated protein kinase 13, mRNA (cDNA clone
MGC:99536 IMAGE:6107307), complete cds.
ACCESSION BC085196
VERSION BC085196.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1681)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1681)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20986527.
FEATURES Location/Qualifiers
source 1..1681
/db_xref="H-InvDB:HIT000266107"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99536 IMAGE:6107307"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1681
/gene="MAPK13"
/gene_synonym="p38delta"
/gene_synonym="PRKM13"
/gene_synonym="SAPK4"
/db_xref="GeneID:5603"
/db_xref="MIM:602899"
CDS 70..843
/gene="MAPK13"
/gene_synonym="p38delta"
/gene_synonym="PRKM13"
/gene_synonym="SAPK4"
/codon_start=1
/product="MAPK13 protein"
/protein_id="AAH85196.1"
/db_xref="GeneID:5603"
/db_xref="MIM:602899"
/translation="MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAID
KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD
FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE
DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTGQILHPVPATDPQEG
FHSAVPTGQPPGCGPAGEDAGARRGQAPDGRAGPHPSLL"
BASE COUNT 383 a 466 c 476 g 356 t
ORIGIN
1 gggcgctggg agcccgttgg gccgcgaacg cagccgccac gccggggccg ccgagatcgg
61 gtgcccggga tgagcctcat ccggaaaaag ggcttctaca agcaggacgt caacaagaca
121 gcctgggagc tgcccaagac ctacgtgtcc ccgacgcacg tcggcagcgg ggcctatggc
181 tccgtgtgct cggccatcga caagcggtca ggggagaagg tggccatcaa gaagctgagc
241 cgaccctttc agtccgagat cttcgccaag cgcgcctacc gggagctgct gctgctgaag
301 cacatgcagc atgagaacgt cattgggctc ctggatgtct tcaccccagc ctcctccctg
361 cgcaacttct atgacttcta cctggtgatg cccttcatgc agacggatct gcagaagatc
421 atggggatgg agttcagtga ggagaagatc cagtacctgg tgtatcagat gctcaaaggc
481 cttaagtaca tccactctgc tggggtcgtg cacagggacc tgaagccagg caacctggct
541 gtgaatgagg actgtgaact gaagattctg gattttgggc tggcgcgaca tgcagacgcc
601 gagatgactg gctacgtggt gacccgctgg taccgagccc ccgaggtgat cctcagctgg
661 atgcactaca accagacagg ccaaatccta catccagtcc ctgccacaga cccccaggaa
721 ggatttcact cagctgttcc cacgggccag cccccaggct gcggacctgc tggagaagat
781 gctggagcta gacgtggaca agcgcctgac ggccgcgcag gccctcaccc atcccttctt
841 tgaacccttc cgggaccctg aggaagagac ggaggcccag cagccgtttg atgattcctt
901 agaacacgag aaactcacag tggatgaatg gaagcagcac atctacaagg agattgtgaa
961 cttcagcccc attgcccgga aggactcacg gcgccggagt ggcatgaagc tgtagggact
1021 catcttgcat ggcaccgccg gccagacact gcccaaggac cagtatttgt cactaccaaa
1081 ctcagccctt cttggaatac agcctttcaa gcagaggaca gaagggtcct tctccttatg
1141 tgggaaatgg gcctagtaga tgcagaattc aaagatgtcg gttgggagaa actagctctg
1201 atcctaacag gccacgttaa actgcccatc tggagaatcg cctgcaggtg gggccctttc
1261 cttcccgcca gagtggggct gagtgggcgc tgagccaggc cgggggccta tggcagtgat
1321 gctgtgttgg tttcctaggg atgctctaac gaattaccac aaacctggtg gattgaaaca
1381 gcagaacttg attcccttac agttctggag gctggaaatc tgggatggag gtgttggcag
1441 ggctgtggtc cctttgaagg ctctggggaa gaatccttcc ttggctcttt ttagcttgtg
1501 gcggcagtgg gcagtccgtg gcattcccca gcttattgct gcatcactcc agtctctgtc
1561 tcttctgttc tctcctcttt taacaacagt cattggattt agggcccacc ctaatcctgt
1621 gtgatcttat cttgatcctt attaattaaa cctgcaaata ctctaaaaaa aaaaaaaaaa
1681 a
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