LOCUS BC085004 2249 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens KH-type splicing regulatory protein, mRNA (cDNA clone MGC:99676 IMAGE:6597976), complete cds. ACCESSION BC085004 VERSION BC085004.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2249) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2249) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-OCT-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: o Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504864. FEATURES Location/Qualifiers source 1..2249 /db_xref="H-InvDB:HIT000266093" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99676 IMAGE:6597976" /tissue_type="Ovary, teratocarcinoma" /clone_lib="NIH_MGC_109" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2249 /gene="KHSRP" /gene_synonym="FBP2" /gene_synonym="FUBP2" /gene_synonym="KSRP" /db_xref="GeneID:8570" /db_xref="HGNC:HGNC:6316" /db_xref="MIM:603445" CDS 75..2207 /gene="KHSRP" /gene_synonym="FBP2" /gene_synonym="FUBP2" /gene_synonym="KSRP" /codon_start=1 /product="KHSRP protein" /protein_id="AAH85004.1" /db_xref="GeneID:8570" /db_xref="HGNC:HGNC:6316" /db_xref="MIM:603445" /translation="MSDYSTGGPPPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGG PGGGGPGGGSAGGPSQPPGGGGPGIRKDAFADAVQRARQIAAKIGGDAATTVNNSTPD FGFGGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLII GRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGG PPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQN TNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV GVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARIINDLLQS LRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRGGENVKAI NQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQLIEEKIEGPLCPVGPGPGG PGPAGPMGPFNPGPFNQGPPGAPPHAGGPPPHQYPPQGWGNTYPQWQPPAPHDPSKAA AAAADPNAAWAAYYSHYYQQPPGPVPGPAPAPAAPPAQGEPPQPPPTGQSDYTKAWEE YYKKIGQQPQQPGAPPQQDYTKAWEEYYKKQAQVATGGGPGAPPGFLAPPTVFQPLLS SALAQLPRPRPSPLPGLVCCLFICSRGD" BASE COUNT 488 a 737 c 698 g 326 t ORIGIN 1 cccgcgttga gccgccgccg ccgccgccgc ctcctcagct tcagcctccg cgccaggccc 61 ggccccgccg cgccatgtcg gactacagca cgggaggacc cccgcccggg ccgccgccgc 121 ccgccggcgg gggcggggga gccggaggcg ccgggggagg ccctccgccg ggcccgccag 181 gcgcggggga ccggggcggc ggcggtcccg gcggcggcgg cccgggcggg gggtcggccg 241 ggggcccctc tcagccaccc ggcggaggcg gcccgggaat ccgcaaggac gctttcgccg 301 acgccgtgca gcgggcccgc cagattgcag ccaaaattgg aggcgatgct gccacgacag 361 tgaataacag cactcctgat tttggttttg ggggccaaaa gagacagttg gaagatggag 421 atcaaccgga gagcaagaag ctggcttccc agggagactc aatcagttct caacttggac 481 ccatccatcc tcccccaagg acttcaatga cagaagagta cagggtccca gacggcatgg 541 tgggcctgat cattggcaga ggaggtgaac aaattaacaa aatccaacag gattcaggct 601 gcaaagtaca gatttctcca gacagcggtg gcctacccga gcgcagtgtg tccttgacag 661 gagccccaga atctgtccag aaagccaaga tgatgctgga tgacattgtg tctcggggtc 721 gtgggggccc cccaggacag ttccacgaca acgccaacgg gggccagaac ggcaccgtgc 781 aggagatcat gatccccgcg ggcaaggccg gcctggtcat tggcaagggc ggggagacca 841 ttaagcagct gcaggaacgc gctggagtga agatgatctt aattcaggac ggatctcaga 901 atacgaatgt ggacaaacct ctccgcatca ttggggatcc ttacaaagtg cagcaagcct 961 gtgagatggt gatggacatc ctccgggaac gtgaccaagg cggctttggg gaccggaatg 1021 agtacggatc tcggattggc ggaggcatcg atgtgccagt gcccaggcat tctgttggcg 1081 tggtcattgg ccggagtgga gagatgatca agaagatcca gaatgatgct ggcgtgcgga 1141 tacagttcaa gcaagatgac gggacagggc ccgagaagat tgctcatata atggggcccc 1201 cagacaggtg cgagcacgca gcccggatca tcaacgacct cctccagagc ctcaggagtg 1261 gtcccccagg tcctccaggg ggtccaggca tgcccccggg gggccgaggc cgaggaagag 1321 gccaaggcaa ttggggtccc cctggcgggg agatgacctt ctccatcccc actcacaagt 1381 gtgggctggt catcggccga ggtggcgaga atgtgaaagc cataaaccag cagacgggag 1441 ccttcgtaga gatctcccgg cagctgccac ccaacgggga ccccaacttc aagttgttca 1501 tcatccgggg ttcaccccag cagattgacc acgccaagca gcttatcgag gaaaagatcg 1561 agggtcctct ctgcccagtt ggaccaggcc caggtggccc aggccctgct ggcccaatgg 1621 ggcccttcaa tcctgggccc ttcaaccagg ggccacccgg ggctccccca catgccgggg 1681 ggccccctcc tcaccagtac ccaccccagg gctggggcaa tacctacccc cagtggcagc 1741 cgcctgctcc tcatgaccca agcaaagcag ctgcagcggc cgcggacccc aacgccgcgt 1801 gggccgccta ctactcacac tactaccagc agcccccggg ccccgtcccc ggccccgcac 1861 cggcccctgc ggccccaccg gctcagggtg agccccctca gcccccaccc accggccagt 1921 cggactacac taaggcctgg gaagagtatt acaaaaagat cggccagcag ccccagcagc 1981 ccggagcgcc cccacagcag gactacacga aggcttggga ggagtactac aagaagcaag 2041 cgcaagtggc caccggaggg ggtccaggag ctcccccagg cttcctggcc ccccccacgg 2101 tgttccagcc cctcctctct tccgccctgg ctcagctccc gcggccccgc ccgtcccccc 2161 tcccaggact ggtctgttgt cttttcatct gttcaagagg agattgaaac tgaaaacaaa 2221 atgagaacaa caaaaaaaaa aaaaaaaaa //