LOCUS BC084572 1096 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens Notch homolog 2 (Drosophila) N-terminal like, mRNA
(cDNA clone IMAGE:6376831), partial cds.
ACCESSION BC084572
VERSION BC084572.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1096)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: l Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24041034.
FEATURES Location/Qualifiers
source 1..1096
/db_xref="H-InvDB:HIT000266080"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6376831"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1096
/gene="NOTCH2NL"
/gene_synonym="N2N"
/db_xref="GeneID:388677"
CDS <1..1033
/gene="NOTCH2NL"
/gene_synonym="N2N"
/codon_start=2
/product="NOTCH2NL protein"
/protein_id="AAH84572.1"
/db_xref="GeneID:388677"
/translation="TRAAAEERRTRGAGSRGICAGLRSVAPGPEPLKQEEGRREWGSS
IGTPSPCGSAQAAAAAAAEEATEKIPALRPALLWALLALWLCCATPAHALQCRDGYEP
CVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRC
ASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLS
HPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQ
CLQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPETVRRGTELWERDREV
WNGKEHDEN"
BASE COUNT 255 a 279 c 341 g 221 t
ORIGIN
1 cacgagggcg gcggccgagg agcggcggac tcggggcgcg gggagtcgag gcatttgcgc
61 tgggcttcgg agcgtagcgc cagggcctga gcctttgaag caggaggagg ggaggagaga
121 gtggggctcc tctatcggga ccccctcccc atgtggatct gcccaggcgg cggcggcggc
181 ggcggcggag gaggcgaccg agaagatacc cgccctgcgc cccgctctgc tgtgggcgct
241 gctggcgctc tggctgtgct gcgcgacccc cgcgcatgca ttgcagtgtc gagatggcta
301 tgaaccctgt gtaaatgaag gaatgtgtgt tacctaccac aatggcacag gatactgcaa
361 atgtccagaa ggcttcttgg gggaatattg tcaacatcga gacccctgtg agaagaaccg
421 ctgccagaat ggtgggactt gtgtggccca ggccatgctg gggaaagcca cgtgccgatg
481 tgcctcaggg tttacaggag aggactgcca gtactcgaca tctcatccat gctttgtgtc
541 tcgaccttgc ctgaatggcg gcacatgcca tatgctcagc cgggatacct atgagtgcac
601 ctgtcaagtc gggtttacag gtaaggagtg ccaatggacc gatgcctgcc tgtctcatcc
661 ctgtgcaaat ggaagtacct gtaccactgt ggccaaccag ttctcctgca aatgcctcac
721 aggcttcaca gggcagaagt gtgagactga tgtcaatgag tgtgacattc caggacactg
781 ccagcatggt ggcacctgcc tcaacctgcc tggttcctac cagtgccagt gccttcaggg
841 cttcacaggc cagtactgtg acagcctgta tgtgccctgt gcaccctcgc cttgtgtcaa
901 tggaggcacc tgtcggcaga ctggtgactt cacttttgag tgcaactgcc ttccagaaac
961 agtgagaaga ggaacagagc tctgggaaag agacagggaa gtctggaatg gaaaagaaca
1021 cgatgagaat tagacactgg aaaatatgta tgtgtggtta ataaagtgct ttaaactgaa
1081 aaaaaaaaaa aaaaaa
//